Shewanella vesiculosa: KDH10_003343
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Entry
KDH10_003343 CDS
T08322
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00470
D-Amino acid metabolism
svm00550
Peptidoglycan biosynthesis
svm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDH10_003343
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDH10_003343
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
KDH10_003343
Enzymes [BR:
svm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
KDH10_003343
Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
Precursor biosynthesis
Amino acid ligase
KDH10_003343
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GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UJL42211
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Position
3884478..3885800
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AA seq
440 aa
AA seq
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MQTQYTHIVLGLGATGLSVVRFLATKGIKPLVMDSRRHPPGADTLAQEFADIELLAGGFD
CRYLVQASQIIISPGVPVDTPEVRAALDMGIEVIGDIELFAREIADRKPCVVGITGSNGK
STVTTLVYDMLLTAGKSVAIGGNIGTPALDLLPQNADFFVLELSSFQLETTASLHCIAAT
CLNISEDHMDRYSDLNSYREAKLRLYPQSRFVMYNRDDELTYPIEPMNQNNFGLGVPEGD
AWGLSDGKIFHGDSEIMNLNEVTLIGSHNHANLLAAMALADACGVGKESMIEVAKTFAGL
SHRCELVGVKQGVTYINDSKATNVGATVAALEGLNSHLGDLYLIAGGDGKGSDFRPLAEP
LSNITQLITLGRDGRKIAKLKSGAIEVTSMAEAVAKAAELASSGDIVLLSPACASLDMYK
NFMARGDDFRQCVESLADGE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcaatacacgcacattgttttaggcttgggggctacagggctctcggtcgtg
cgttttttagcgactaaaggcatcaaacctttagtgatggacagtcgtcgtcatccgcct
ggtgcagataccttggcgcaagagtttgccgatattgagttattagccggtgggtttgat
tgtcgttatttagttcaggctagccaaattatcattagcccaggtgtgcctgttgatacg
cctgaagtgcgtgcggcattagatatgggcattgaagtaattggtgatattgagttattt
gcccgagagatagcggatagaaaaccgtgtgttgttggtatcactgggtcaaatggtaaa
tctacagtaacgaccttagtatatgacatgctgctaacggccggtaagtcggtggctatt
ggcggcaatattggtacgccagcgctggatttattgcctcaaaatgctgatttttttgta
cttgaactgtcgagttttcaacttgaaaccactgcttcgttacattgtattgcggctaca
tgccttaatattagcgaagatcatatggatcgctatagcgacctaaactcctaccgcgaa
gcaaagttacgtttatatccacaaagccgttttgtcatgtataaccgcgatgatgaatta
acttatccaattgaaccaatgaatcaaaataattttggtttaggcgtgcctgaaggtgat
gcgtggggattaagtgatggcaagatttttcatggtgatagcgaaattatgaatctaaat
gaagtgaccttaattggcagtcataatcacgctaacttattagccgcaatggcattagcg
gatgcttgcggggttggtaaagagtccatgattgaagtggctaaaacctttgctggttta
agccatcgttgtgagcttgtcggtgtgaaacaaggtgtgacgtacatcaatgactccaaa
gcgactaatgttggcgcaacagttgccgcactggaagggcttaactcgcatttaggcgat
ttatacttgatcgctggcggcgatggtaaaggcagcgattttcgtccccttgcagaaccg
ctttccaatattactcaattgattaccttgggccgagatgggcgcaaaatagccaaatta
aaatcaggagctatcgaggtcacatcgatggctgaggccgttgcaaaagccgctgagtta
gcatcgtctggtgatatcgtattattgtctccggcgtgtgccagcctagatatgtataag
aactttatggctcgcggtgatgattttagacaatgtgtggagtcattagccgatggcgaa
taa
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