Shewanella vesiculosa: KDH10_003372
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Entry
KDH10_003372 CDS
T08322
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svm02044
]
KDH10_003372
02035 Bacterial motility proteins [BR:
svm02035
]
KDH10_003372
Secretion system [BR:
svm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KDH10_003372
Bacterial motility proteins [BR:
svm02035
]
Pilus system
Pilus assembly proteins
KDH10_003372
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Phage_holin_3_6
DUF996
Motif
Other DBs
NCBI-ProteinID:
UJL42225
LinkDB
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Position
complement(3923303..3924565)
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AA seq
420 aa
AA seq
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MATATVKRKPKTKKNTKLQPKVFTFQWKGTNRDGQRTSGELKGSTVSEIRSVLKAQGVTP
KGVRKKSAPLWKSEKNITAMDIAMITRQIATMLAAGVPLVTTLELLGRGHEKAKVRELLG
TILSDVQSGIPLSDSLRPHRRYFDDLYVDLVAAGEHSGSLDAVFDRIATYREKAEQLKSK
IKKAMFYPAAVVVVAILVTSLLLLFVVPQFEDIFKGFGAELPAFTQLIVGISRWLQASWY
LFVIAIVVAIWLFKRAHRTSQSFRDRIDQMVLKIPVIGDILHKAAMSRFARTLSTTFAAG
VPLIDGLESAAGASGNYVYRKALLKVRQEVMSGMQMNVAMRTTGLFPDMLIQMVMIGEES
GGLDEMLNKVANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQMGNIVG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcaactgtcaaaagaaagccaaaaacaaaaaaaaacaccaaactccaacct
aaggttttcacctttcaatggaagggtaccaatcgcgatggtcaacgcacctcgggggag
ttaaaaggttccactgtttctgaaattcgcagcgtgttgaaagcccaaggtgttacccca
aagggagtacgtaaaaaatctgcgcctctatggaaaagtgaaaaaaatattaccgcaatg
gacattgcaatgatcacccgccaaattgctactatgttggctgcgggtgttcctttagtg
actacccttgaattgcttggccgcggccatgaaaaagctaaagtgcgcgaattactaggc
actattttatctgatgtgcaatccggtatccctctatcagattcactcagacctcaccgc
cgctattttgatgatttatatgtcgatttggtcgctgctggcgaacattcaggctccctt
gatgcagtatttgaccgcatagcaacctaccgtgagaaagctgagcaactaaagtctaaa
attaaaaaagccatgttttatccggcggcggtcgttgttgttgctatattagtaacatca
ctactactattatttgtggtgccgcaatttgaagatatttttaaaggttttggcgctgaa
ctgccggcatttactcaacttattgtaggcatatctcgttggctgcaagcttcatggtat
ttatttgttatcgccattgttgttgcgatttggctttttaaacgagcccatcgtacttca
cagagttttcgcgatcgaatcgatcaaatggtgcttaaaatccctgttattggtgatatt
ctccacaaagcggcgatgtcgcgtttcgctcgcactttatcaactacctttgccgccgga
gtgccgttaatcgatggcttagaatcagctgctggtgcgtcaggtaattatgtttatcgc
aaagcattactcaaagttcgccaagaagtgatgtcaggtatgcaaatgaatgttgctatg
cgcaccacaggcttgttcccagatatgctcatccagatggtaatgattggtgaggagtct
ggcggcttagacgagatgctcaacaaagtggctaatatttatgagatgcaggttgatgat
gcggtagatggtttatcaagcctcattgaacccattatgatggtggtcattggtacacta
gtcggcggtttaattgtcggtatgtatttacctattttccaaatgggtaatattgtcggt
tag
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