Shewanella vesiculosa: KDH10_003378
Help
Entry
KDH10_003378 CDS
T08322
Symbol
pdhR
Name
(GenBank) pyruvate dehydrogenase complex transcriptional repressor PdhR
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svm03000
]
KDH10_003378 (pdhR)
Transcription factors [BR:
svm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
KDH10_003378 (pdhR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
TrmB
HTH_DeoR
HTH_41
HTH_11
HTH_24
Fe_dep_repress
HTH_36
Motif
Other DBs
NCBI-ProteinID:
UJL42230
LinkDB
All DBs
Position
3930760..3931512
Genome browser
AA seq
250 aa
AA seq
DB search
MAYIKINQPKISDVIMEQLERMILEGSIQPGQKLPPERELAVQFEVSRPSLREAIQKLEA
KGLLMRRQGGGTYVKEQLWQSLADPIVELMHNDSESQYDLLEFRHATEGMMAYFAALRGT
DADMQNIKNRINEVETATEVEAQADAIVRFYRAVAEASHNVAMLHLVLSLTPVLHKNVAQ
NLELLSRREEASTMANDHRRALLAAIVRRDPDAAREASNEHLSYIEEVMLSVRKEDSRLQ
RSLRRLKSGV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttatattaagattaaccagccaaaaatttctgatgtgatcatggagcaattagag
cggatgatcctagaaggcagtatacagccgggtcagaagctacctcctgaacgcgaactc
gcggtgcaatttgaagtgtctcgtccttctctacgtgaagcgattcaaaaattagaagca
aaagggttgctcatgcgtcgtcaaggcggtggcacctatgttaaagaacaactgtggcaa
agtcttgccgatcctatcgttgagttaatgcataacgattctgaaagtcagtatgactta
ctcgagttccgtcacgctactgaaggcatgatggcgtattttgctgccttgcgtggcaca
gatgcggatatgcaaaacattaaaaaccgtattaacgaagttgaaaccgcaacggaagta
gaagcgcaggccgatgccattgtgcgtttttatcgtgcggtcgctgaggcatcgcacaat
gttgctatgctgcatttagtattaagtttaacccctgtgctgcataaaaatgtggcacaa
aatctggaacttttaagccgacgcgaagaagcttccaccatggcaaatgatcacagacgc
gcgttactggctgcgattgtacgccgggacccagacgctgcacgtgaagcttcgaatgag
cacttaagctatatcgaagaagtcatgttgtcagtaagaaaagaagacagtcggttgcaa
cgtagtttgcgccgtttaaagagcggcgtttaa
DBGET
integrated database retrieval system
