KEGG   Shewanella vesiculosa: KDH10_003381
Entry
KDH10_003381      CDS       T08322                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
svm  Shewanella vesiculosa
Pathway
svm00010  Glycolysis / Gluconeogenesis
svm00020  Citrate cycle (TCA cycle)
svm00260  Glycine, serine and threonine metabolism
svm00280  Valine, leucine and isoleucine degradation
svm00310  Lysine degradation
svm00380  Tryptophan metabolism
svm00620  Pyruvate metabolism
svm00630  Glyoxylate and dicarboxylate metabolism
svm00640  Propanoate metabolism
svm00670  One carbon pool by folate
svm00785  Lipoic acid metabolism
svm01100  Metabolic pathways
svm01110  Biosynthesis of secondary metabolites
svm01120  Microbial metabolism in diverse environments
svm01200  Carbon metabolism
svm01210  2-Oxocarboxylic acid metabolism
svm01240  Biosynthesis of cofactors
Module
svm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
svm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
svm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
svm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:svm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KDH10_003381 (lpdA)
   00020 Citrate cycle (TCA cycle)
    KDH10_003381 (lpdA)
   00620 Pyruvate metabolism
    KDH10_003381 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    KDH10_003381 (lpdA)
   00640 Propanoate metabolism
    KDH10_003381 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KDH10_003381 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    KDH10_003381 (lpdA)
   00310 Lysine degradation
    KDH10_003381 (lpdA)
   00380 Tryptophan metabolism
    KDH10_003381 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KDH10_003381 (lpdA)
   00670 One carbon pool by folate
    KDH10_003381 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:svm04147]
    KDH10_003381 (lpdA)
Enzymes [BR:svm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KDH10_003381 (lpdA)
Exosome [BR:svm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KDH10_003381 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 GIDA HI0933_like Thi4 NAD_binding_8 DUF2226 FAD_binding_3 DAO
Other DBs
NCBI-ProteinID: UJL42233
LinkDB
Position
3936474..3937907
AA seq 477 aa
MSNEIKTQVVVLGAGPAGYSAAFRAADLGLDTIIVERFSTLGGVCLNVGCIPSKALLHVA
KVIEEAKIVADHGVVFGEPKIDLDKLRSFKNKVISQLTGGLGGMSKMRKVDVVNGFGKFT
GPNSLEVTAEDGTVTVVQFEQAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLL
VMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKKFNLILETKVT
AVDAKDDGIYVTMEGKNAPTEPVRYDAVLVAIGRSPNGKSLAAEKAGVNVDERGFINVDK
QLRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVISGMKHYFDPKVIPSIAYTNPEVAW
VGLTEKEAKEQGIAYETATFPWAASGRAIASDCSEGMTKLIFDKETHRVIGGAIVGSNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEMYEGSITDLPNPKAVKKKK
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagtaacgaaatcaaaactcaagtagtcgtactaggagcaggcccagcaggttattct
gcggcgtttcgtgctgctgacttaggcttagacaccataattgttgagcgtttcagtacc
cttggtggtgtgtgtctaaacgttggttgtattccttcaaaagcactattgcacgtagca
aaagtcattgaagaagccaaaattgttgctgaccatggtgtggtttttggtgagccaaag
attgatttagacaaattacgtagctttaaaaataaagtcattagccaattaaccggcggt
ttaggcggaatgtctaaaatgcgtaaagttgatgtggttaatggttttggtaaatttacc
ggccctaacagcttagaagtgactgctgaagatggcactgtgactgttgttcagttcgaa
caagccattattgcagcaggttcacgtccaattaaattaccgtttattccacatgaagac
ccacgtatttgggactcaactgacgcacttgaactgaaagaagtgcctggtaagttgctt
gttatgggtggtggtattattggtctagaaatgggtactgtgtattcatctttaggcagc
gaaattgacgtggttgaaatgttcgatcaagttattcctgctgcagataaagacgtagtt
cgcgttttcactaagcaaattaagaagaagtttaatcttattcttgaaactaaagtgacc
gcagttgacgcgaaagatgatggtatctacgtgacaatggaaggcaagaatgcgccgaca
gaacctgtacgttacgatgctgtgttagtcgcaattggtcgttcacctaatggtaagtct
ttagctgctgaaaaagcaggtgtaaatgttgatgaacgtggctttattaacgttgataag
cagttacgtactaacgtaccgcatatttatgctatcggcgatatcgttggtcaacctatg
ttggctcataaaggtgtgcatgaaggtcatgttgctgcggaagtcatttcgggcatgaag
cactacttcgaccctaaagtgatcccatcaattgcttatactaatcctgaagtagcatgg
gtcggtctaactgagaaagaagcgaaagagcaaggtattgcttacgaaactgcgactttc
ccttgggctgcaagtggccgtgcaatcgcttcagattgcagtgaaggtatgactaagcta
attttcgacaaagagactcatcgcgtgatcggtggtgctattgttggatctaacggcggt
gaattattaggtgaaattggcctagcaattgaaatgggttgtgatgctgaagatatcgca
ttaacgattcatgctcacccaacattgcatgagtctgtaggcttagcagctgaaatgtat
gaaggttcaattactgacttacctaaccctaaagcggttaagaaaaagaagtaa

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