Shewanella vesiculosa: KDH10_003442
Help
Entry
KDH10_003442 CDS
T08322
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
svm
Shewanella vesiculosa
Pathway
svm03030
DNA replication
svm03430
Mismatch repair
svm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDH10_003442
03430 Mismatch repair
KDH10_003442
03440 Homologous recombination
KDH10_003442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svm03032
]
KDH10_003442
03400 DNA repair and recombination proteins [BR:
svm03400
]
KDH10_003442
03029 Mitochondrial biogenesis [BR:
svm03029
]
KDH10_003442
DNA replication proteins [BR:
svm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KDH10_003442
DNA repair and recombination proteins [BR:
svm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
KDH10_003442
TLS (translesion DNA synthesis) factors
Other SOS response factors
KDH10_003442
Mitochondrial biogenesis [BR:
svm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
KDH10_003442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
Motif
Other DBs
NCBI-ProteinID:
UJL42285
LinkDB
All DBs
Position
4024741..4025451
Genome browser
AA seq
236 aa
AA seq
DB search
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTIATSESWKDQQGQMQERTEWHNIVMY
RRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQATGQDRYKTEINAMEMQMLDSRNSGDNSG
GGQYQGQGQSSGQNMGQQQSRPAPAPQARPPQAQYNQAAPATGNAAYQAQPNAGQQGGYQ
QQAAPAQQAAPAYAPKPAAPQGNFQPQNAPAQRPAPQPQQNFTPDLDEGWDDDIPF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtgaataaagtaattttggtaggtaacttaggtaaagatcctgag
gttcgttacatgccaaacggcaacgccgtagccaactttactatagcgacaagtgagtcg
tggaaagaccagcaaggtcaaatgcaagaacgtactgagtggcataacattgtgatgtat
cgccgtcttgcagaaattgctggcgagtacttaaaaaaaggctctaaagtttatttagaa
ggcaaattgcaaaccagtaaatggcaagatcaggctaccggtcaagaccgttacaagact
gaaattaacgcgatggaaatgcaaatgttagacagccgcaactctggtgataacagcggt
ggtggtcaatatcagggacaaggtcaaagctctggacaaaacatgggacaacaacagtct
cgtcctgcaccggctcctcaagctcgtccgccacaggcacaatacaaccaagcagcacct
gccacaggtaatgcagcttaccaagctcagccaaatgccggtcagcaaggcggttatcag
caacaggctgcgccagcacaacaagctgcaccagcttacgcaccaaagccagcggcacca
cagggtaatttccaaccacaaaatgcccctgcacagcgtcctgctccacagccacagcaa
aatttcaccccagatttagatgaaggttgggatgacgatatcccgttttag
DBGET
integrated database retrieval system
