Shewanella vesiculosa: KDH10_003487
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Entry
KDH10_003487 CDS
T08322
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svm
Shewanella vesiculosa
Pathway
svm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDH10_003487 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svm03019
]
KDH10_003487 (groL)
03110 Chaperones and folding catalysts [BR:
svm03110
]
KDH10_003487 (groL)
03029 Mitochondrial biogenesis [BR:
svm03029
]
KDH10_003487 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svm04147
]
KDH10_003487 (groL)
Enzymes [BR:
svm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KDH10_003487 (groL)
Messenger RNA biogenesis [BR:
svm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KDH10_003487 (groL)
Chaperones and folding catalysts [BR:
svm03110
]
Heat shock proteins
HSP60 / Chaperonin
KDH10_003487 (groL)
Mitochondrial biogenesis [BR:
svm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KDH10_003487 (groL)
Exosome [BR:
svm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KDH10_003487 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KDH10_003487 (groL)
Exosomal proteins of breast cancer cells
KDH10_003487 (groL)
Exosomal proteins of colorectal cancer cells
KDH10_003487 (groL)
Exosomal proteins of bladder cancer cells
KDH10_003487 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UJL42325
LinkDB
All DBs
Position
4076168..4077805
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPMITKDGVSVAKEI
ELTDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKLLSQECSDTKAIAQVGTISANSDESIGDIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSIELDSPFILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVIITKDNTTIIDGSGDQVQISARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIKDVEVLNEDQKHGVVIALRAMEAPLRQIATNAGQEASVVANTVKNGEGNFGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMIAEVPQDSAPDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtcttatttggtaacgacgcacgcgtaaaaatgcttgcaggcgtt
aacatcctagccaacgcagttaaagtaaccttaggccctaaaggtcgtaacgttgtttta
gataaaagctttggttcgccaatgatcaccaaagatggtgtgtcagtggctaaagaaatc
gaactaacagacaagttcgaaaacatgggcgcacaaatggtcaaagaagttgcttctaaa
gccaatgatgctgccggtgacggtaccactactgcaacagtattagcacaagctattgtt
gttgaaggcctaaaagcagttgcagcgggtatgaacccaatggaccttaagcgcggtatc
gacaaagcggttatcgcagccgttgctgaacttaaactactttctcaagagtgttcagac
actaaagccattgctcaagtaggtacaatttctgctaactctgatgagtcaatcggcgac
atcattgccaccgcaatggaaaaagtcggtaaagaaggcgttatcacagttgaagaaggc
caagcgcttgaaaacgaattagacgttgttgaaggtatgcagtttgaccgtggttaccta
tcaccatacttcatcaacaagccagaaactggcagcattgaattagacagcccattcatt
ttattagtagacaaaaaagtttctaatatccgtgaattgctaccaatccttgaaggtcta
gcgaaaacaggtaagccattgcttatcgttgcagaagacgttgaaggcgaagcattagcc
acactagttgtgaacaacatgcgtggcatcgttaaagtagctgctgttaaagcacctggt
tttggcgaccgtcgtaaagcaatgctacaagacgttgcaatcttaactggcggtactgtt
atcgctgaagaaatcggtctagaacttgaaaaagccactctagaagatttaggtacagct
aagcgcgtcatcatcactaaagataacactactatcatcgacggtagtggcgaccaagtg
caaatttctgcacgtgtttcgcaaatcaaacaacaagttgaagagtcaacttcagactac
gacaaagaaaagcttcaagagcgtatggctaagttagctggcggtgttgcagtcatcaaa
gttggcgcagcaaccgaagttgaaatgaaagagaaaaaagcgcgcgtagaagatgcatta
catgcaactcgcgcagcggttgaagaaggtgtggtcgccggtggtggtgttgcccttgtt
cgcgtagcaagcaaaattaaagatgttgaagtattgaacgaagaccaaaaacacggtgta
gtgattgcactacgtgctatggaagcacctttacgtcaaatcgcaactaacgctggtcaa
gaagcatcagttgttgctaacactgttaaaaacggtgaaggtaacttcggttacaacgcg
ggtaacgacacctacggtgacatgttagaaatgggtatcctagacccaactaaagtgact
cgtagcgcgctacagttcgccgcgtctattgctggtcttatgatcacaacagaagcgatg
attgctgaagtaccacaagattctgcgccagatatgggcggaatgggtggtatgggcgga
atgggcggcatgatgtaa
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