Shewanella vesiculosa: KDH10_003552
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Entry
KDH10_003552 CDS
T08322
Name
(GenBank) class I SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svm03009
]
KDH10_003552
Enzymes [BR:
svm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
KDH10_003552
Ribosome biogenesis [BR:
svm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDH10_003552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
PrmA
Methyltransf_31
Methyltransf_15
MTS
TRM
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
UJL42380
LinkDB
All DBs
Position
complement(4146115..4147122)
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AA seq
335 aa
AA seq
DB search
MSIQAVLADALAKRSAFFEQASHDKTDCYRVFHGTVEGENGLNIDRYGDAWLIQTFHQTL
TAQQLEDISSILSAHADFHIVYNDRSGSHSRIANHSENEAQDYSQSTQVIHENGIAFTSK
LRHEGQDPLLFLDMRIGREFIRNNSQDKTVLNLFSYTCGIGIAAAMGGARRVMNVDFSSF
ALAAGQKNAELNNVTDVCEFVQSDAFPALRQLAGLPIGGRRNQKLPKYPKLRATQFDLVF
LDPPRFAKSAFGIVDLVNDYQGLFKPAVLTTKAGGTIVCCNNVAKVDRQAWYDSLVRCVE
KQGRTVTSSQWLHCHPDFPAFDDNHPLKIVALTIN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcaagctgttttagccgatgcgctagccaaacgaagtgctttttttgagcaa
gcgtcccacgataagaccgattgttatcgcgtttttcatggcactgttgaaggtgaaaat
ggcttaaacatcgaccgctacggcgatgcatggttaatccaaacctttcaccaaacgcta
acggcgcaacaacttgaagacatatcaagcatccttagcgcccatgctgatttccatatc
gtatataacgatcgctcaggcagccattctcgcattgctaaccatagcgaaaatgaagcc
caagattactcacaatcaacccaagttatccatgaaaatggtatagcatttacctctaaa
ttacgtcatgaaggtcaagacccactactgtttttagacatgcgcattggccgcgaattt
attcgcaacaatagccaagataaaaccgtattaaatctgttttcatatacgtgtggcatt
ggtattgctgcggcaatgggcggcgcgcgacgcgtcatgaatgtcgacttctcatcgttt
gcattggctgctgggcaaaaaaatgccgagttaaataatgtcactgatgtgtgtgagttt
gtccaaagtgatgcgtttccggcactgcgtcaattagccggtttacctatcggcggacgt
cgtaatcaaaaactgccaaaatacccaaaactgcgcgcgactcaatttgatttagtgttt
ttagatcccccgcgttttgccaagagtgcttttggtatagtcgatctggtcaatgattac
caaggcctatttaagccagcagtgctgacaactaaagccggtggcactatagtttgctgt
aataatgtcgctaaagtggatcgccaagcatggtacgacagcttagtgcgttgtgttgaa
aaacaaggccgcacagtcactagcagccagtggcttcactgtcaccctgacttccccgcc
tttgatgacaatcatccattaaaaatcgtcgccttgacgataaattaa
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