Shewanella vesiculosa: KDH10_003658
Help
Entry
KDH10_003658 CDS
T08322
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00130
Ubiquinone and other terpenoid-quinone biosynthesis
svm01100
Metabolic pathways
svm01110
Biosynthesis of secondary metabolites
svm01240
Biosynthesis of cofactors
Module
svm_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
svm_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
KDH10_003658 (ubiD)
Enzymes [BR:
svm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
KDH10_003658 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
UJL42467
LinkDB
All DBs
Position
complement(4269604..4271085)
Genome browser
AA seq
493 aa
AA seq
DB search
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRSGGPALLFENPTNHTMPVL
VNLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPSGFKDAIAKIPMFRQALNMPPK
TVRNPLCQQVVKSGDDVDLTALPIQHCWPGDVAPLVTWGLTITKGPRQKRQNLGIYRQQL
LSKNKLIMRWLDHRGGALDFKDFKQLHPGERYPVVVALGSDPVTILGAVTPVPDSMSEYA
FAGLLRGERTEVCKAISCDLEVPATSEIILEGYIDPDETAVEGPYGDHTGYYNETDSFPV
FTVTHITHRKDAIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSY
RMAIISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDEDVNCRNWQDVIWAITTRMDP
TRDTMMVDNTPIDYLDFASPVAGLGSKMGLDATNKWPGETTREWGTPIVMDETTKQRIDQ
IWDDLGIEDVPTL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaagatttacgcagcttcatcgatcatttagaagcaaatggagagttaaag
cgcattagctatcctgttgatcctcatttagagatgacagagattgctgatcgagtttta
cgatcaggtggccccgcgctgttatttgaaaatccgaccaaccataccatgccggtactg
gttaacttatttggtacgcccaaacgtgttgctatggcattgggaaaagatgacccttta
gcattacgtgaagtcggtgaattattagcattcttaaaagaaccagaaccaccgagtggc
tttaaagatgccatagctaaaataccaatgtttaggcaagcgttaaatatgccgccgaaa
acagtgcgcaatccactttgtcagcaagtagtcaaaagcggtgatgatgtcgacttaacc
gcgttgccaatccagcactgctggccaggcgatgtggcaccattagtcacctggggatta
accatcaccaaagggccgcgacaaaaaagacaaaatctaggcatttatcgccaacagtta
ttaagtaaaaataaactgatcatgcgctggctggaccaccgtggcggagccctagacttt
aaagactttaaacagcttcatccaggtgaacgttatcctgtcgtagtggcattaggtagc
gatcctgtgactattttgggtgctgtaaccccagtgccagattcgatgagtgaatatgcc
tttgcaggcttgttgcgcggcgaacgtaccgaggtctgtaaagctattagctgcgatctt
gaagtaccagccaccagcgaaattattcttgaaggctatatcgatcctgatgaaaccgca
gtagaaggtccatacggcgatcacacgggttactataacgaaacagactcattcccagta
tttaccgtgacccatattactcaccgtaaagatgccatatatcatagtacctataccggc
cgtccaccagatgaaccggctatgttaggcgtggcattaaatgaagtatttgttcctatc
ctacgtaaacaataccctgaaattattgacttttatctgccgcctgaaggctgctcttat
cgtatggcaatcatttcaatccgtaaacaatatccgggtcatgccaagcgtgtcatgatg
ggagcatggtcattccttcgccaatttatgtacaccaaatttattgttgtggttgatgag
gatgtcaattgccgtaattggcaggatgttatttgggctattaccacacggatggatcct
actcgcgataccatgatggtggataatacccctatcgattaccttgactttgcatcaccc
gttgccggtttaggatcgaaaatgggtttagatgccaccaataaatggccaggcgaaacc
accagagaatggggtactcccattgtgatggatgagacaacaaaacaaagaatcgaccaa
atttgggatgatctcggcatagaagatgtgccaacattgtaa
DBGET
integrated database retrieval system
