Shewanella vesiculosa: KDH10_003665
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Entry
KDH10_003665 CDS
T08322
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svm03019
]
KDH10_003665 (rapZ)
Messenger RNA biogenesis [BR:
svm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KDH10_003665 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
Integrase_1
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UJL42474
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Position
complement(4278286..4279149)
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AA seq
287 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLAQLKGNNDLVAISVDVRNI
AEQGKVLQDQLALLEHDTEIISFFLNSNDKVLLKRYSETRRLHPLSKNHISLQEAIILEG
RLLEPIAKIVDHYIDTSALNIYELSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWEIALRPLTGLDEPVQEFLGRQPLVNKFIWQIENLFETWMPHLERNNRSY
LTIAIGCTGGQHRSVYIADQLAKRFRHGSKHTVNARHRELNLTDTDS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtcatagtatcgggacgttcaggctcaggaaaatctgttgctctaagagta
ttagaagatctagggtattattgtgttgataatttgcctttaccactgattggcacatta
ctggctcagctcaaaggtaataacgatctagtggcaattagtgttgatgtacgcaacatt
gccgagcaaggtaaagtccttcaagatcaacttgccttacttgaacatgacactgaaatt
attagcttctttttgaattctaatgataaagtgctactcaaacgctatagcgaaacgcgt
cgattacacccgttatctaaaaatcatatttcactgcaagaagcgatcatattagaaggc
cgtttacttgagcctatcgcaaaaattgttgatcattatattgacacctctgccctgaat
atttacgaattaagcgaccaagtcaggcaaatattgttaggtagtgtcgataaagagtta
gtgattaactttgagtcttttggctttaaacacggtatgccaacagaagctgactttatg
tttgatgtgcgctttttacctaatccacactgggaaatagcactacgaccactcacaggt
ttagacgaaccggtacaagagtttttaggtcggcaacctctagtgaataagtttatctgg
caaattgaaaacttatttgaaacctggatgccgcatttagaacgtaataaccgcagctat
ctgactatcgccattggttgcaccggtggccagcatcgctcggtatatatagccgatcaa
ttagcaaaaaggtttagacatggcagtaaacatacagttaatgctcgccacagagaatta
aatttaactgatactgacagctaa
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