Shewanella vesiculosa: KDH10_003743
Help
Entry
KDH10_003743 CDS
T08322
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
svm
Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svm02000
]
KDH10_003743
Transporters [BR:
svm02000
]
Other transporters
Pores ion channels [TC:
1
]
KDH10_003743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
FIMP
Motif
Other DBs
NCBI-ProteinID:
UJL42541
LinkDB
All DBs
Position
complement(4356549..4359758)
Genome browser
AA seq
1069 aa
AA seq
DB search
MLRLACLFLCFLIVNTLSDSVFASTPLTLDKRLGLNSQAENQPLDIPSQIAELQSSIEKL
QIEQQTYTNIERSNSETKLSLAGQLREAQIPLSLDDDIDLDQQASMAYFHLSELKETESS
LNEQLRTISQRQRQLPDLIVQAENALTQHNKTQQVPIETPLGQRNQLQTELLTQHIATLQ
AERLASPKQLEITQLQQQLNRLLLSQQESFIELINKHNIESRQQKTADTIANNLVDAQEL
ADPLSQELSRSNQQYAEQLQTLTSNIKSAIEKQQRVEKRYQSQNAQLSNVLEQITWVKTN
SAFGDRFLQMLQSLPKPPNLDKLQTELADARLERYQLEQHQALNSQQLDDSEMFNETQIK
LLQSQQVLIDQLLQSYDQYLAEFAKLRIGYEQLNQLHNTLKNTLNEHLFWVPNAPSIGPL
WLIDLSHSSVWLLQPSQWQALQQSWSENSNYWAWWGILLLCCLMAHDMLTPKFNTAISRY
AVFVGNVTQDKFKYTIKTLIISLVYALIKPLPVIVAGFIFSRSEQNMVHAVGVGILAIGV
SYLIYQFFFLLTVEKGILISHFRRPKKIIKQAQQTLASFVIISAPLIGLMGFTEALDTSL
VRNSLGRGAFIVFCVVLFLLYKDVMLLIGQYRQNKPSATNMAIIHKALWAILIVTPIFSA
ILAAVGYYFTAFQLLLQLQISVLLGLGFLLTYQLIKRWMLIERRLIAFDRAKAKRAERLA
QRERGELQNNEPIETYEEPIVDLETISSQSLGLVRSILFLAFFASLLGILSQTHTAVFSF
LDGITLWTTNSNVNGIEQQVPITLKSISFGIMLVGFSVVIAKNLPGLMELTLLQRLDLSP
GTGFAITTVSSYLVVFFGILFGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLI
ILFEKPIRIGDTVTIRDLSGTVSKIQIRATTIVDWDHKEIIVPNKAFITEQLVNWSLSNP
ITRVIVTVSVSRDADPTKVEMLLHQAVRECELSLTMPEPEVWFAGFGQHTQDYEIRSYAK
DMSARWPLRHSLHKLINKKLKENNVELAYPQMEVHINHTPKESTGLYKG
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtttagcgtgtttattcctgtgtttccttatagttaatacactgtcagattct
gtatttgctagcactcccctaacccttgataaacgattggggctaaatagccaagccgaa
aatcagccacttgatataccatcgcaaattgccgaactgcaaagcagtattgaaaaactg
caaatagaacagcaaacttataccaatatcgaacgctctaacagtgaaaccaagctctca
ttggcaggacaacttcgtgaagcacaaatcccattaagccttgatgatgatatcgatctg
gatcagcaggcttcaatggcttatttccatttatcagaattaaaagagactgagtctagc
ctcaatgagcaattacggactatttcacaacgtcaaagacaactacctgatttaattgtt
caagcagaaaatgccttaactcagcacaataaaacccaacaagtaccgattgagacaccc
ttgggccaacggaaccagcttcaaaccgaactgctcactcagcatattgcgaccttacag
gcggaacgattagcgagtccgaaacaactcgagattacccagcttcaacagcagctcaac
cgcttgttattaagccaacaagaaagctttattgagcttatcaacaaacacaatattgaa
tctcgtcagcaaaaaaccgctgatactatagccaataacttagttgatgcccaagagcta
gccgatcctttatctcaagagctgagtagatcaaaccaacaatatgctgaacaattacaa
acgctcaccagtaatattaaatcagcaatagagaagcaacagcgggttgagaaacgctat
cagtctcaaaatgcacagctttcaaacgtactagaacaaattacttgggtaaaaaccaac
tcggcatttggcgaccgttttttgcaaatgctgcaatcattacctaaaccgcccaaccta
gacaaactgcaaacagaattagctgatgcacggctggagcgctatcaattagagcaacat
caagcattaaacagtcaacaacttgatgacagtgaaatgtttaatgaaacccagataaaa
ctcttacagtcacagcaagtactcatagatcaactattacaaagttatgatcaatattta
gctgagtttgccaagttacgtattggttatgagcagctaaaccaactgcataacacatta
aaaaacacccttaacgaacatttattttgggtacctaatgcccccagcattggtccattg
tggctcatcgatttaagtcacagtagtgtatggttactgcaacctagccagtggcaagcg
ttacaacaatcatggtctgaaaacagcaattattgggcttggtggggcattttattatta
tgctgcttgatggcccatgacatgcttacccctaagtttaataccgcaattagtcgctat
gcggtatttgttggtaacgtgacgcaagataaatttaaatacaccatcaaaaccctcatc
atcagcttagtgtatgccttaataaagcctttaccggttattgtggccggttttattttc
tcccgttctgagcaaaacatggttcatgccgtgggagtcggtattttagctattggtgtc
agttatctgatttatcaattctttttcttattaacggtagaaaaaggtattttaatcagc
cacttcagacggccgaaaaaaataatcaaacaagcgcagcaaaccttggcttcatttgtg
atcatttccgcacccttaattggcttaatgggcttcactgaagcattagatacttcatta
gtacgtaacagtcttggccgtggggcatttatcgttttctgtgttgtgctgtttctcctg
tacaaagatgtcatgttattgattggccaatatcgccaaaataagcctagcgcgacgaat
atggcgatcattcacaaagccctatgggccatcttgattgttacgcctatttttagcgcc
atcttggctgcggtcggctactacttcacggctttccagcttctgttacaactgcaaata
tcagtattattaggcttaggctttttactaacttaccagctcattaaacgctggatgctg
attgagcgccgtttaatcgcattcgatcgcgctaaagccaaacgtgcagagcgacttgcg
caacgtgaaagaggcgagttgcaaaacaatgagccaatagaaacctatgaagaaccaatt
gttgatttagaaaccatctccagtcagtcgctcggcttagtgcgatcgattttattttta
gctttttttgccagtttattgggtattttgtcgcagactcataccgcagtattctcattt
ttagatggcatcaccttatggaccaccaacagcaatgtgaatggcattgagcagcaagtg
ccaatcacattaaaatcaatttcattcggcatcatgttagtgggcttctcggtggtgatt
gctaaaaacctcccaggattaatggaactgacgttattgcaaagattagatttatcgcca
ggaaccggctttgctattaccactgtgagcagttatttggtggtattttttggcatactg
tttggcttttcaactcttggaatggagtggtctaaattacagtggctagttgccgcatta
tcagtgggtttaggttttggcctgcaagaaatttttgctaactttatttctggtttgatc
atcctatttgaaaaacccattcgaattggcgataccgtcacgattcgcgacctgtccgga
acggtcagtaaaattcaaatccgagccaccacgattgtcgactgggatcacaaagaaatt
attgtgcccaacaaagcctttattactgaacaactggttaactggtcgctatccaacccg
ataactcgcgtcatcgtcacggtatcggtatctcgtgatgccgacccaaccaaagtggaa
atgctactgcatcaagcggttcgagaatgtgaattatcgctaaccatgccagaaccagaa
gtatggtttgccggttttggtcagcacactcaagattacgaaattcgctcttatgctaaa
gacatgtcggctcggtggccgctacgccatagcctgcataaactgattaataaaaagctc
aaagaaaacaatgttgaacttgcctacccacaaatggaagttcatattaatcatacccct
aaagaatctactggattatacaaaggctaa
DBGET
integrated database retrieval system
