Shewanella vesiculosa: KDH10_003801
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Entry
KDH10_003801 CDS
T08322
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00550
Peptidoglycan biosynthesis
svm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDH10_003801 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
svm01003
]
KDH10_003801 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
KDH10_003801 (mrcB)
Enzymes [BR:
svm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KDH10_003801 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KDH10_003801 (mrcB)
Glycosyltransferases [BR:
svm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KDH10_003801 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
svm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KDH10_003801 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
UJL42588
LinkDB
All DBs
Position
4419203..4421503
Genome browser
AA seq
766 aa
AA seq
DB search
MTKKTKKSSVTTKKTGPSWWRKLWSLTWKLSIVGIAVVSFYAIYLDQIIAQKFEGQKWHL
PAQVFSRSMALYPGAAISHPQLMAELKLLGYRKVANPRQVGEFSASSTRIELWRRPFLHP
EGNQVAQKVMISFDSQGVSSVKRMSDKRELAVFHLEPVLLDRIIAGDGEDRLFVRAPEMP
SMIIDALILVEDRSFYDHFGVNPLAIARAAVVNITAGRTVQGGSTLTQQLAKNFFLSSER
SIVRKVREALMALIIDFRYSKDEILEAYLNEVYMGQDKARGVHGMGLASQFYFGRPIAEL
TVSQQAFLVAVIKGPSYYNPWRYAERAQERRDLVLRLLMENDKLTVAQYKAAVESPIGLR
SATKSVHQKLPAFFAVVKQELRDRYGDSLLKQSGVKVYTTLDPMAQEAAEKAVLSTMASL
DKRAKNIQVGMVVTDKYTGGIAAMVGDKQPSYEGFNRAVEIRRPIGSLIKPFVYASALRQ
ADKFTLATPIEDKPITLQNEQGKTWSPKNVDKKFSGQVPLLSAFKDSMNVPTVNVGLAVG
VDKVAATLKSSGWDDDISPYPSMLLGAVNGSPLMVAQVYQTLADEGRYRKLSSITAVLDS
QNQALDVSRVPSSMAIDPATDYLVQYAMNQVVRSGTAKRLGAAFPGVRLAGKTGTSNDSR
DSWFAGFDERNVAAIWVGQDDNSKTGLYGSSGAMAVYQAFLNERPPLSLRMMPVNGVING
YFDRTTGAAKQGNCANIVGLPALESSFHPVANCGESLSWWQKLVGQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaaccaaaaagtcttcggtaaccacaaaaaagacaggaccctcttggtgg
cgaaagctgtggtcactcacatggaaattatccatagttggtattgccgttgtaagcttt
tatgctatttatttagaccaaattattgcgcaaaaatttgaaggccaaaagtggcattta
cctgcgcaagtttttagccgttcaatggcgctatacccgggagctgcgataagccatcct
cagctaatggctgaattaaaactattgggttatcgtaaagtggctaacccacgtcaagtt
ggcgagttttcagcatccagcacccgcattgaattatggcgtcggccgtttttgcaccca
gaaggtaatcaagtcgcacaaaaagtgatgattagctttgattctcagggcgtgagctcg
gttaagcgcatgtctgataaacgtgaattagccgtatttcatttagaaccagttttactt
gaccgtattattgccggcgatggcgaagatcgcttatttgtgcgcgcgcctgaaatgcct
tcgatgatcatcgatgcgcttattttggttgaagaccgcagcttttatgatcacttcggg
gtaaacccattggccattgcaagagctgcagttgtcaatatcaccgcgggtcgtaccgtt
caaggtggttcaaccttaactcaacagttagccaaaaatttctttttaagcagtgaacgt
tcaattgtgcgtaaagtacgtgaagcccttatggcgctgatcattgattttcgatatagc
aaagatgaaattttagaggcttatctcaatgaagtgtacatgggccaagataaagcccgt
ggtgtgcatggtatggggctagcatcacagttttactttggtcgccccattgctgagctg
accgtgtcgcaacaagcctttttagttgcggttattaaggggccttcttattacaatcct
tggcgttatgctgagcgagcccaagagcgacgtgatctagtattacgtttattgatggaa
aacgataaattaaccgttgctcaatataaagctgctgtagagtcgcctattggtcttcgc
agtgcgacaaaatcggtacatcaaaaattaccggcattttttgccgtggtaaaacaagag
ttgcgcgaccgttatggcgactcattactcaagcaatcgggtgttaaagtctataccacg
cttgatcctatggcccaagaagcagctgaaaaagccgtgttatctaccatggcatcactg
gataaacgggctaaaaatattcaagtcggtatggtggttaccgataaatacaccggtggt
attgctgccatggtgggtgataagcaacccagttatgaaggcttcaatcgtgcggtagaa
attagacgtccaatcggatcgttaattaagccattcgtgtatgccagcgcattacgccaa
gcggataagtttaccttagcgaccccaattgaagataaacctattacgcttcaaaatgag
caaggtaaaacctggtcacctaaaaatgtcgataaaaagttcagcggtcaagtgccttta
ttaagtgcatttaaagattcaatgaacgttccaacggtaaatgttggtttggctgttgga
gtagacaaggttgctgctacgttaaaaagttcaggttgggatgatgatatttctccttat
ccatccatgttacttggtgctgtaaatggttcaccattaatggtggctcaagtttatcaa
acccttgcagatgaaggacgttatcgtaagttatcatcgattactgctgtgctcgacagt
caaaaccaagcattagatgttagccgtgtgccatcgtcgatggcgattgatcctgctacc
gattatttagtccaatatgcaatgaatcaagtggtgcgttctggtaccgctaagcgctta
ggtgctgcattccctggcgtacgtctagcgggtaaaacggggaccagtaacgacagtcgc
gactcatggtttgcaggttttgatgaacgtaacgtggcagctatttgggttggtcaagac
gataacagtaaaactggtttatacggcagtagtggtgcaatggctgtgtatcaagctttt
ctaaatgaacgtccgccgcttagtttgcgtatgatgcctgttaatggcgtaataaacggt
tattttgatcgaacaactggcgcggctaaacaaggtaattgtgccaatattgttggctta
ccggctttagaatcaagctttcacccagtggctaattgtggcgagtcactctcgtggtgg
cagaagctggtggggcaataa
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