Shewanella vesiculosa: KDH10_003962
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Entry
KDH10_003962 CDS
T08322
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svm
Shewanella vesiculosa
Pathway
svm00061
Fatty acid biosynthesis
svm00071
Fatty acid degradation
svm01100
Metabolic pathways
svm01212
Fatty acid metabolism
svm02024
Quorum sensing
svm04146
Peroxisome
Module
svm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KDH10_003962
00071 Fatty acid degradation
KDH10_003962
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KDH10_003962
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDH10_003962
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svm01004
]
KDH10_003962
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svm04147
]
KDH10_003962
Enzymes [BR:
svm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KDH10_003962
Lipid biosynthesis proteins [BR:
svm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KDH10_003962
Exosome [BR:
svm04147
]
Exosomal proteins
Exosomal proteins of breast milk
KDH10_003962
Exosomal proteins of breast cancer cells
KDH10_003962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UJL42709
LinkDB
All DBs
Position
complement(4587044..4588648)
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AA seq
534 aa
AA seq
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MPYDADSTLDLDQYSSIVDLIETACEKFAGNTAYACLGKSTTFSEIERDSRYFASYLQHC
TSLQAGDRVAIQLPNITQFVIAAYGVIRAGMVLVNTNPMYTERELIHQFNDSGAKALIVL
SDLLPTLTKVIDNTAIELVISTHAMDLIQPQGQPETPFSKVEFMAVLAEGAKHPYNPIKP
NHDDLIALQYTGGTTGLSKGAMLNHGNLLANSGQVKSRIASTMNEGHDVFVAPLPIYHIY
AFMVNLVLYFESGGCSVLIPNPRDIAGLINTMKAYPFTGFAGLNTLFVGLCHQPEFKALD
FSRMKITISGGTALTSAAANLWQQTTGCMISEGYGLSETSPVVSLNAPGHQRLGTIGKPV
LGTEVRVLDMDDNEVAIGQAGELAVRGPQVMQGYWHKAEETANVMTKDGFFKTGDIGIAS
VDGYHTIVDRKKDMIIVSGFNVYPNEVEDVLASHELVLECAVVGVEDERSGEAVKAVIVL
KQPPTDIEAVKQTINDYCRSQLTAYKVPRIIEFTEQLPKSTVGKVLRRELRKSA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgccttatgatgctgattcaacactcgacctagatcaatactcatccattgttgattta
atcgaaacagcgtgtgaaaagttcgctggcaatactgcgtatgcttgtcttggtaaaagc
accacctttagtgaaatagaacgtgattcacgctattttgccagctacttacagcattgc
acctcattgcaagcgggtgacagagtcgcaatccaactgcctaatattactcagtttgtc
attgcggcttatggggttattcgcgcggggatggtgctcgtgaatacaaatcctatgtac
acagaacgtgaactaattcatcaatttaatgactcaggggctaaagccttaattgtatta
tctgatctattaccaacattaactaaggttatcgataacaccgctatcgagttagttatt
tcaacgcatgcaatggaccttattcagccacaaggccagccagaaacaccatttagtaaa
gtagaatttatggccgtgcttgctgaaggtgccaaacatccatataacccaataaaaccc
aaccatgatgacttaattgcactgcaatacactggcggcacaaccggtttgtccaaaggt
gctatgctcaatcatggcaaccttttagccaactcaggccaagtgaaatcgcgaattgcc
agcaccatgaacgaagggcatgatgtatttgtcgcgccattaccgatttatcatatctat
gcttttatggttaacttagtcctgtattttgaatcaggtggttgctcagtattaatccct
aatcctcgcgacattgcagggttgatcaatactatgaaagcttatccctttactgggttt
gcaggcttaaacacattatttgtcggtttatgtcatcaacccgaatttaaagccttagat
ttcagcagaatgaaaataaccatttcaggtggtaccgccttaaccagcgccgcggctaat
ttgtggcaacaaactactggttgtatgatttcagaaggctatggtttgtctgaaacatca
cctgtcgtcagccttaatgcacctggtcatcagcgtcttggcactattggcaaacccgtt
ttgggcactgaagtgcgagtgcttgatatggatgacaatgaagtggctatcggtcaagca
ggagaacttgctgttcgcggacctcaggtgatgcaagggtattggcataaagccgaagaa
accgctaacgtcatgactaaagacggctttttcaaaaccggcgatattggtattgccagt
gttgatggttatcacaccattgtcgatcgtaaaaaagacatgattattgtctcgggcttt
aacgtctatcctaatgaagttgaagacgtacttgcaagccatgagctagtgctagagtgt
gcggtcgtcggggtggaagatgaacgttctggcgaagcggtaaaagcagtgattgtatta
aaacagccgccaacggatattgaggcagtaaaacagacaattaatgattattgtcgaagc
caactcacggcttataaagtcccacgtattattgaatttaccgaacaactgccaaaaagc
acagtaggtaaagttttacgtcgtgaattacgcaagtctgcttga
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