KEGG   Shewanella vesiculosa: KDH10_004068
Entry
KDH10_004068      CDS       T08322                                 
Name
(GenBank) AAA family ATPase
  KO
K02450  general secretion pathway protein A
Organism
svm  Shewanella vesiculosa
Brite
KEGG Orthology (KO) [BR:svm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svm02044]
    KDH10_004068
Secretion system [BR:svm02044]
 Type II secretion system
  General secretion pathway protein
   KDH10_004068
SSDB
Motif
Pfam: AAA_22 AAA_16 PG_binding_1 SLFN-g3_helicase AAA_30 AAA_19 Sigma54_activ_2 AAA AAA_5 AAA_14 nSTAND3 TrwB_AAD_bind AAA_7 TsaE ABC_tran TniB Sigma54_activat GspA_C39-like Tas3-like_N AAA_11 AAA_24 cobW AAA_25 PIF1 NACHT AAA_18
Other DBs
NCBI-ProteinID: UJL42797
LinkDB
Position
4707640..4709313
AA seq 557 aa
MYKAFYGLNDNPFSIAPNPHYMFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
RCLLQQIPENTDTAFILNPSLTELELLATLCDELEIKYGENPTLKQLTDLISTYLLTNHK
NARNTVLIIDEAQHLRSEVLEQLRLLTNLETNTKKLLQVILIGQPELQQLLKRQDLRQLA
QRITARYHLLPLNKDEIGLYVLHRLQVAGRHEPLFTRKAIAALHKHSGGIPRLTNLLCER
ALMAGYGQAKVPIDHKMVNQAAVEVLGDIDAPSDKRWPFVAATALVLAFGLSFYLFNRSA
NDDSLNSNTALASNQTQQSVNPPALATIPSATNQSITASTSQLQTSPPVVNAQQQILRQA
MLQSSSIDNAFAGLFGLWNKQPIIGLSACQAAQQQDLACYQQQGNWYSIMRLNYPAVVYL
QDAQANVFYGVIVERQVEQILLQLGEQQFWVNKDWFDRHFSGTFEILWQPDGVLPREIGQ
SSSLAQVQWLENSLALVNKRRARLLTQFDGELEQQLMQFQRQHGLKPDGIAGNQTLVQLN
LYLSQQGPRLSASSERN
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtataaagccttctatggattaaacgataatccattctcaattgcgcctaaccctcat
tatatgttcttgagcgatcgtcatcgcgaagcgctggcacacttaacttacgggttaggt
gaaacaggtggatttgtattgttgacgggggaagttggtaccgggaaaactaccgtttca
cgttgtttattacaacaaataccggaaaatacagatacggcatttattcttaatccatca
cttaccgagttagagcttttggcgacattgtgtgatgagttggaaattaagtatggcgaa
aatccgaccttaaaacagctgaccgatctcatcagtacttacttactcactaatcataaa
aatgcccgtaataccgtactgattattgatgaggcgcagcatttgcgttctgaggtgtta
gagcagttgcgtttgctgactaaccttgaaaccaataccaaaaaactgttgcaggtcatt
ttgattggccaaccagagttacagcaactgttaaaacgccaagatcttcgccagttagca
cagcggatcaccgctcgttaccatctattaccattgaataaagatgaaattggcttatat
gttctgcaccgtttacaagtagcgggtcggcacgagcctttatttacccgtaaagcgata
gccgcgttacataagcactctggcggtattccacgcttgactaacttattatgtgaacga
gcactaatggctggttatggtcaagctaaggtgccgattgatcacaagatggttaatcaa
gccgccgttgaagtgttaggggatattgatgctcctagcgataagcgttggccatttgtt
gcagcaacagcgctggtattggcatttggtttgtcgttttatctgtttaatcgctcggct
aatgacgatagccttaactccaatacagcattagctagcaatcaaacgcagcaatctgtt
aatccgccagcgttagccactattcctagtgccacaaatcaatctattacagcatcgaca
tcgcaactacaaaccagcccgccagttgttaacgcgcagcaacagattttgcgtcaagct
atgttacaaagcagtagcattgataatgcttttgccgggttatttggtttatggaataaa
caacctatcattggtttatctgcctgccaggctgcgcagcaacaagatttagcctgttac
cagcaacaaggtaattggtacagtattatgcggctaaattatcctgcggtggtgtattta
caagatgctcaggcgaatgtgttttatggggtgattgtagagcgccaagtggagcaaatt
ttattgcaattgggcgagcaacaattctgggtaaacaaagattggtttgatcgtcatttt
agcggtaccttcgaaattctttggcaaccagacggtgtattaccccgtgaaatcggtcag
tcttcgagtctggcgcaagtacagtggttagaaaatagcttagcgctagtcaataaacgc
cgagcacgcttactgacacaattcgatggtgaattagaacagcaattaatgcaatttcag
cgtcagcatggcctaaagcctgatggtattgctggcaatcaaaccttagtacaactgaac
ttatatttaagccagcaaggcccgcgtttgagtgcatcttcggagcgcaattaa

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