KEGG   Streptomyces vinaceus: CP980_00500
Entry
CP980_00500       CDS       T06865                                 
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
svn  Streptomyces vinaceus
Brite
KEGG Orthology (KO) [BR:svn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svn03021]
    CP980_00500
Transcription machinery [BR:svn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CP980_00500
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 GerE HTH_23 HTH_Crp_2 KORA HTH_28 MarR_2 HTH_3 NirdL-like_HTH DUF7343 MarR Trp_repressor HTH_37 HTH_24 DUF134
Other DBs
NCBI-ProteinID: QEV43762
UniProt: A0A5J6J0Y8
LinkDB
Position
complement(96088..97008)
AA seq 306 aa
MSHVATATIPAQGTAPDASARAEPAAAPGHRAEPLPQIHNPREVAPTDARELSRVFLVRL
RELEEGTREYQYARNTLIEMNISLVRFAARRFAARINAGIELDDLIQVGTIGLIKAIDRF
DPEREVEFSTLALPYITGEIKRYFRDTTWAVHVPRRLQELRVELAKSQETLTEVLGRAPN
VKEIAEHLGLSEEDVIEGLVAANGYSSDSIDSATGATERTAAGREARPLSDTVGDLDPAM
ALFEDFLTLAPLLRSLDERDREILRMRFAQEMTQSEIGAELGISQMQVSRLLTRILTHLR
TGMLTA
NT seq 921 nt   +upstreamnt  +downstreamnt
atgtctcacgtcgccacagccaccattcccgcccaggggaccgccccggacgcctccgcc
cgcgccgaacccgcagctgccccagggcaccgcgcagagcccctgccgcagatccacaac
ccccgcgaggtggcgcccacggacgccagggagctgtcgcgtgtgttcctcgtacgtctg
agagagctggaggaaggcacgcgggagtaccagtacgcgcgcaacaccctgatcgagatg
aacatctccctcgtccgcttcgcggcccgccggttcgccgcccgcatcaacgccggcatc
gaactcgacgacctcatccaggtcggcacgatcggcctgatcaaggccatcgaccgattc
gaccccgaacgcgaggtcgagttctccaccctcgcccttccctacatcacgggcgagatc
aagcggtacttccgcgacaccacctgggccgtacacgtcccccgccgcctgcaggaactc
cgcgtcgagctcgccaagtcccaggagacgctcaccgaggttctcggacgcgcaccgaac
gtcaaggagatcgccgagcacctcgggctctccgaggaagacgtcatcgaggggctggta
gcggccaacggctacagcagcgactccatcgactcggccaccggcgccacggagcgcaca
gcagcaggccgtgaggcccggccgctgagcgacacggtcggtgatctcgacccggccatg
gctctcttcgaggacttcctcaccctcgcgcccctcctgcgctcgctcgacgaacgcgac
cgcgagattctccgcatgcgcttcgcccaggagatgacccagtccgagatcggcgccgag
ctcggcatctcgcaaatgcaggtgtcccgcctactcacccgcatcttgacccacctgcgc
accggcatgctgaccgcctag

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