Streptomyces vinaceus: CP980_06575
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Entry
CP980_06575 CDS
T06865
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP980_06575 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svn03019
]
CP980_06575 (recQ)
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_06575 (recQ)
Enzymes [BR:
svn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP980_06575 (recQ)
Messenger RNA biogenesis [BR:
svn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CP980_06575 (recQ)
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP980_06575 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
SaeA_1st
TrwC
Motif
Other DBs
NCBI-ProteinID:
QEV44767
UniProt:
A0A5J6J0H3
LinkDB
All DBs
Position
complement(1465477..1467486)
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AA seq
669 aa
AA seq
DB search
MSLVDAPTETPDALEVLHRVFGYDSFRGEQQQIIEHVAGGGDALVLMPTGGGKSLCYQIP
ALVRAGTGVVISPLIALMQDQVDALTALGVRAGFLNSTQDPYERQAVEQAFLAGELDLLY
LAPERLRTEGTQRLLDRGTVSLFAIDEAHCVAQWGHDFRPDYLALSMLHERWPKVPRIAL
TATATEATHAEIAARLGLAEGEARHFVASFDRPNIQYRIAPKNNPTRQLLELIRTEHAGD
AGVVYCLSRASVEKTAAFLVEHGIDAVAYHAGMDSRTRAANQARFLREDGVVVVATIAFG
MGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGEPATAWLAYGLQDVVQQRKMIEGSEG
DETHRRSLAAHLDAMLALCETVECRRVRLLAYFGQAAAGPCGNCDTCLTPAESWDGTVAA
QKLMSTVWRLAKERRQKFGAGQIIDILQGKKTAKVIQFDHDALSVFGIGTDLSTAEWRGV
VRQLLASGLLAVEGDYGTLVLTDASGEVLGGRRSVPMRKEAAPAPAARKSSGSGSGSGKS
GRVPVDLPAEAVPVFEALRAWRGATAKEQGVPAYVVFHDATLREIATRLPGTAEELGTIS
GVGEAKLAKYAEGILAALAGTGAAAAAASPAPPSPEPSRAAAPEPPAPHAEEEPPFDFDE
TDPPWDDWE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgtcgacgcccccaccgagacccccgatgcccttgaggtgctgcaccgcgtc
ttcgggtacgactccttccgcggcgagcagcagcagatcatcgagcacgtggccggcggc
ggcgacgcgctggtcctgatgcccaccggcggcggcaaatcgctctgctaccagatcccg
gcgctggtcagagccggtacgggcgtggtgatctcgccgctgatcgcgctcatgcaggac
caggtggacgccctgaccgccctcggggtgcgggccgggttcctcaactcgacccaggac
ccgtacgagcgccaggccgtcgagcaggccttcctcgcgggggagctggacctgctgtac
ctggccccggagcggctgcgcaccgagggcacccagcggctgctcgaccggggcacggtg
tcgctcttcgcgatcgacgaggcgcactgcgtcgcccagtggggccacgatttccggccc
gactacctcgcgctgtcgatgctgcacgagcgctggcccaaggtgccgcggatcgcgctg
acggcgacggccactgaggccacgcacgccgagatcgcggcccggctgggcctggcggag
ggcgaggcccggcacttcgtggccagcttcgaccggcccaacatccagtaccggatcgcc
ccgaagaacaacccgacccggcagctgctggagctgatccgcaccgagcacgccggggac
gccggagtcgtctactgcctgtcgcgggcctcggtggagaagacggccgcgttcctggtg
gagcacggcatcgacgcggtcgcctaccacgcgggcatggactcccggacccgcgcggcc
aaccaggcgcgcttcctgcgggaggacggggtcgtggtggtggccacgatcgccttcggc
atgggcatcgacaagccggacgtgcgcttcgtcgcacacctggacctgccgaagtcggtc
gagggctactaccaggagaccggtcgcgccgggcgtgacggggagccggccacggcctgg
ctcgcgtacgggctccaggacgtggtgcagcagcgcaagatgatcgagggctccgaaggc
gacgagacgcaccgccgctcgctggccgcgcacctggatgcgatgctcgcgctgtgcgag
accgtcgagtgccgccgggtgcggctgctggcgtacttcgggcaggccgccgccgggccc
tgcggcaactgcgacacctgcctgaccccggccgagtcctgggacggcacggtcgccgcg
cagaagctgatgtcgacggtgtggcgactggcgaaggagcggcgccagaagttcggcgcc
ggccagatcatcgacatcctccagggcaagaagacggccaaggtcatccagttcgaccac
gacgcgctgtcggtcttcgggatcggcacggacctgagcaccgcggagtggcgcggtgtc
gtacggcagctgctggcctcggggctgctggcggtcgaaggggactacgggacgctggtg
ctgacggacgccagcggcgaggtgctcggcggacggcgcagcgtgccgatgcgcaaggag
gcggccccggcccccgcggcccgcaagtcctccggctccggctcgggttcgggcaagtcc
gggcgggtcccggtcgacctgccggcggaggccgtgccggtgttcgaggcgctgcgcgcc
tggcggggggcgaccgcgaaggagcagggcgtcccggcgtacgtggtcttccacgacgcg
acgctgcgggagatcgcgacccggctgccgggcacggccgaggagctcggcacgatcagc
ggggtcggcgaggcgaagctggccaagtacgccgaggggatcctggccgcgctggccggg
accggagccgcggctgccgcggcgtccccggctccgccgtccccggagccgtcccgggcg
gcagcgccggagcccccggccccgcacgccgaggaggaaccgccgttcgacttcgacgag
accgacccgccctgggacgactgggagtag
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