Streptomyces vinaceus: CP980_08845
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Entry
CP980_08845 CDS
T06865
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svn
Streptomyces vinaceus
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svn03009
]
CP980_08845 (rimO)
Enzymes [BR:
svn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP980_08845 (rimO)
Ribosome biogenesis [BR:
svn03009
]
Prokaryotic type
ribosomal protein modification factors
CP980_08845 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEV45158
UniProt:
A0A5J6JC63
LinkDB
All DBs
Position
complement(2032454..2033950)
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AA seq
498 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAARQESAVALPGHAQEPVAEAPADLPDGVAPASGPRAPL
RRRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLV
SENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPY
FDLSFQHSAPDVLRSMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGETEADFKEL
ERFLTHARLDAIGVFGYSDEDGTEAVTYDNKLDEETIAERLAHMQRLAEELTSQRAEERI
GEILEVLVETVEAVDGGDEDETGAYGRAAHQAPETDGQVVFTDSTGLVPGRIVTAKVVGT
LGVDLVAEPLHLDEEAAG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gatgcggacgtcgccgtcgtcaacacctgtggtttcgtcgaagccgccaaaaaggactcc
gtagacgccctgctcgaagccaacgatctcaaggatcacggcaagacccaggccgtcgtc
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggccctccccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgaccgcctccagaccattctg
aacggcggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgcggcccgccaggagagcgcggtggcgctgcccggccacgcgcaggagccggtggcc
gaggcccccgccgatctgcccgacggagtcgctcccgcctccgggccgcgcgcgccgctg
cgccgccgcctggacaagagcccggtcgcctcggtgaagctcgcctccggctgcgaccgg
cgctgctccttctgcgccatcccgtccttccgcggctccttcatctcgcgccgccccagc
gacgtgctgggcgagacgcgctggctcgccgagcagggcgtcaaggagatcatgctggtc
tccgagaacaacacctcgtacggcaaggacctcggcgacatccgcctgctggagaccctg
ctgccggagctcgccgaggtggacggcatcgagcgcgtccgcgtcagctacctccagccc
gccgagatgcggcccggcctgatcgacgtactgacctcgacccccaaggtcgtgccgtac
ttcgacctgtccttccagcactcggcccccgacgtgctgcgctccatgcgccgcttcggt
gacaccgaccgcttcctggagctgctggacaccatccgttccaaggccccgcaggccggc
gtccggtccaacttcatcgtcggcttccccggtgagacggaagccgacttcaaggagctg
gagcgtttcctcacccatgcgcgcctcgacgcgatcggcgtcttcggctactcggacgag
gacggcaccgaggccgtcacgtacgacaacaagctggacgaggagacgatcgcggagcgg
ctcgcgcacatgcagcggctcgccgaggagctcacctcgcagcgcgccgaggagcggatc
ggggagatcctggaggtgctcgtcgaaaccgtcgaggcggtggacggcggcgacgaggac
gagaccggtgcctacgggcgtgccgcgcaccaggcgcccgagaccgacggccaggtcgtc
ttcacggacagcacgggcctggtgcccggccgcatcgtgacggcgaaggtggtcggcacg
ctcggcgtcgacctggtggccgagcccctgcaccttgacgaggaggcggcaggatga
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