Streptomyces vinaceus: CP980_08945
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Entry
CP980_08945 CDS
T06865
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP980_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svn03019
]
CP980_08945
03016 Transfer RNA biogenesis [BR:
svn03016
]
CP980_08945
Enzymes [BR:
svn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CP980_08945
Messenger RNA biogenesis [BR:
svn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP980_08945
Transfer RNA biogenesis [BR:
svn03016
]
Prokaryotic type
tRNA degradation factors
CP980_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
DUF2017
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QEV45172
UniProt:
A0A5J6J570
LinkDB
All DBs
Position
complement(2061587..2063809)
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VATVMALNPDHLYDVIAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIALVKGGAEAPTEEIVAAGLDASKPFIKALC
KAQADLAAKAAKPEGEFPVFLDYQDDVYEALAAAVKGDLAQALTIAGKQDREAELDRVKD
IAAEKLLPAFEGREKEISAAYRSLTKALVRERVIKDKVRIDGRGITDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLAVGTKVQVEIAEIDQRGKLSL
IPVIDGEAAGDDADKDDSDK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcattgacaacggttccttcggcacccgc
accatccgcttcgagacgggccgtctggcccgccaggccgccggctccgccgttgcctac
ctggacgacgacacgatggtgctttccgccaccaccgcgtcgaagaagcccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcgccagtacgcggccggcaagatc
cccggatccttcttccgccgtgagggccgcccctccgaggacgcgatcctcacctgccgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtcgccaccgtcatggcgctcaacccggaccacctgtacgacgtcatcgcgatcaacgcc
gcgtccgcgtccacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtggccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatcgccctggtcaagggcggcgccgaggcgccg
accgaggagatcgtggccgccggcctcgacgcctcgaagcccttcatcaaggccctctgc
aaggcccaggcggacctggcggccaaggccgccaagcccgagggcgagttcccggtcttc
ctggactaccaggacgacgtgtacgaggccctcgcggccgccgtcaagggcgacctcgcc
caggcgctgaccatcgcgggcaagcaggaccgcgaggccgagctcgaccgcgtcaaggac
atcgccgccgagaagctcctcccggccttcgagggccgcgagaaggagatctccgccgcc
taccgcagcctgaccaaggccctggtgcgcgagcgcgtcatcaaggacaaggtccgcatc
gacggccgcgggatcacggacatccgtaccctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggtgagaccggccgcgtgggctcgccc
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgccatcgtgccggtcctgccg
acccgcgaggagttcccgtacgcgatccgccaggtgtccgaggccctcggctccaacggt
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccc
ctcaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgacggcaag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtgaccgccctccagctggacaccaagctggac
ggcatcccggcctccgtcctggccgcggccctcaagcaggcccgcgacgcccgcctccac
atcctcgacgtgatgatggaagcgatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatcccggtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcgcg
gtcggcaccaaggtgcaggtggagatcgccgagatcgaccagcgcggcaagctctccctg
atccccgtgatcgacggcgaggccgccggtgacgacgctgacaaggacgactccgacaag
tga
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integrated database retrieval system
