Streptomyces vinaceus: CP980_09010
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Entry
CP980_09010 CDS
T06865
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
svn
Streptomyces vinaceus
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svn03016
]
CP980_09010 (truB)
Enzymes [BR:
svn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CP980_09010 (truB)
Transfer RNA biogenesis [BR:
svn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CP980_09010 (truB)
Prokaryotic type
CP980_09010 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QEV45185
UniProt:
A0A5J6J3W0
LinkDB
All DBs
Position
complement(2080905..2081840)
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AA seq
311 aa
AA seq
DB search
MSSNAGKTPGGTSRPEAVGGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATG
VLVLGVEKATKLLGHLALTEKEYLGTIRLGQNTLTDDAEGEITSSADASAVTREAVDQGI
AKLSGEIMQVPSKVSAIKIKGVRSYKRARDGEDFEIPARPVTISSFQVYDMRDAEAEDGT
KVVDLVVSVVCSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKIDRARTLDQLQEEL
TVMPIGEAAAAAFPRWDLDARRASLLGNGVRIDMPDAYPAGRTVAVFGPDGVLLGLVENK
GGKAKSLAVFA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacgcagggaagacgccggggggcacctcccggccggaggccgtgggaggg
ctcgtcatcgtcgacaagccctccggcttcacttcgcacgacgtggtcgccaagatgcgc
gggatcgccaagacccgccgcgtcggccacgccggcacgctcgacccgatggcgacgggc
gtgctcgtcctgggcgtcgagaaggccaccaagctcctgggccacctcgcgctcacggag
aaggagtacctcggcacgatccgcctcggccagaacaccctgacggacgacgcggagggt
gagatcacctcctcggcggacgcctccgcggtgacccgcgaggccgtggaccagggcatc
gccaagctgtccggcgagatcatgcaggtcccgtcgaaggtcagcgccatcaagatcaag
ggcgtgcggtcctacaagcgcgcccgcgacggcgaggacttcgagatcccggcccggccg
gtgaccatctcctcgttccaggtgtacgacatgcgggacgcggaggccgaggacggcacc
aaggtcgtcgacctcgtcgtctccgtcgtctgctccagcggtacgtacatccgcgcgctc
gcccgtgacctgggcgccgacctcggcgtcggcggacacctcaccgcgctgcggcgcacc
cgggtgggaccgtacaagatcgaccgggcgcggaccctggaccagctccaggaggagctc
accgtcatgccgatcggcgaggcggcggccgcggccttcccgcgctgggacctcgacgcc
cggcgtgcctcgctgctcggcaacggcgtgcggatcgacatgcccgacgcgtaccccgcg
gggcggacggtggcggtcttcgggccggacggcgtgctgctcggcctcgtggagaacaag
ggcggcaaggccaagtcgctggccgtcttcgcctga
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