Streptomyces vinaceus: CP980_09575
Help
Entry
CP980_09575 CDS
T06865
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP980_09575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_09575
Enzymes [BR:
svn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP980_09575
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP980_09575
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP980_09575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
DZR
Motif
Other DBs
NCBI-ProteinID:
QEV45285
UniProt:
A0A5J6J463
LinkDB
All DBs
Position
complement(2208774..2209634)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAGRTVEAVEVLHPRAVRRHPAGGADFAARLTGRTIGVPQRRG
KYLWLPLEGRDLSVLGHLGMSGQLLVQPEDAADEKHLRIRMRFDDAAGTELRFVDQRTFG
GLSLHENTPDGLPDVIAHIARDPLDPLFDEAAYHAALRAKRTTVKRALLDQSLISGVGNI
YADEALWRARLHYERPTGTLTRPRSAELLGHVRDVMNAALDVGGTSFDSLYVNVNGESGY
FDRSLDAYGREDEPCRRCGTPMRRRPWMNRSSYFCPRCQRPPRVAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaagtcgaagtcgtacggcggggcttggagcgctgggtggccgga
cggaccgtcgaggccgtggaggtgctccacccgcgcgcggtacgccgtcacccggccggc
ggggccgatttcgccgcccggctgacgggccggacgatcggcgttccgcagcggcgcggc
aagtacctctggctgcccctggaggggcgggacctctcggtgctcgggcacctcgggatg
agcggacagctcctcgtccagcccgaggacgccgccgacgagaagcacctgcgcatccgc
atgcgtttcgacgacgccgccgggaccgagctccgcttcgtcgaccagcgcaccttcggc
ggcctctcgctccacgagaacacgccggacgggctgcccgacgtcatcgcgcacatcgcc
cgggacccgctggacccgctcttcgacgaggccgcctaccacgcggcgctgcgcgccaag
cggaccaccgtcaagcgggccctgctggaccagtccctgatcagcggggtcggcaacatc
tacgccgacgaggcgctgtggcgggcgcggctgcactacgagcgcccgaccggcacgctg
acgcgcccccggagcgcggagctcctcggccacgtgcgggacgtgatgaacgcggccctc
gacgtcggcggcaccagtttcgacagcctgtacgtcaacgtgaacggcgagtccggttac
ttcgaccgttcgctcgacgcctacgggcgcgaggacgagccctgccggcggtgcggcacc
cccatgcggcggcggccgtggatgaaccggtccagctacttctgcccgcgctgtcagcgg
ccgccgcgcgtggcgtcgtag
DBGET
integrated database retrieval system
