Streptomyces vinaceus: CP980_11050 Help Entry CP980_11050       CDS       T06865                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism svn  Streptomyces vinaceus Pathway svn03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:svn00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     CP980_11050  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:svn03400]     CP980_11050 Enzymes [BR:svn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      CP980_11050 DNA repair and recombination proteins [BR:svn03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      CP980_11050 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol CHRD NAD_binding_2 Motif Other DBs NCBI-ProteinID:  QEV45539 UniProt:  A0A5J6J3T2 LinkDB All DBs Position complement(2525802..2526707) Genome browser AA seq 301 aa AA seqDB search MTPITMVEGRRIPLSNLDKVLYPETGFTKGEVLHYYATVAPSLLAHIHNRPVSFLRYPDG PDGQLFFTKNPPPGTPDWVKTTPVPRSEDLSAEQVVITDLASLMWAANLVVEFHTPQWPA GGPAVADRLIIDLDPGAPATAVECCAVALWLRERLAADGLEAYPKTSGSKGMHLAVALEP TPSERVSAYAKGLAQEAERALGDLALHRMAKALRPGKVFVDHSQNAAAKTTAAPYTLRAR ARPTVSAPVSWEEVAACRTPEDLVFLADDIPPRLERDGDLFAPLTDPDRAHRLPAPPGGR P NT seq 906 nt NT seq  +upstreamnt  +downstreamnt atgacgccgatcaccatggtggaggggcgtcgcatcccgctctccaacctcgacaaggtc ctgtaccccgagaccggattcaccaagggcgaggtgctgcactactacgccaccgtcgcc ccttcgctgctggcccacatccacaaccggccggtgtcgttcctgcgctatcccgacggc ccggacggacagctcttcttcacgaagaacccgccgcccggcacccccgactgggtgaag accactcccgtgccccgctccgaggacctctccgccgaacaggtggtcatcaccgacctg gcctccctcatgtgggccgccaacctcgtcgtcgagttccacaccccccagtggccggcc ggcggcccggccgtcgccgaccggctgatcatcgacctcgaccccggcgcccccgccacc gccgtcgagtgctgcgccgtcgcgctgtggctgcgcgagcgcctggccgccgacggcctg gaggcgtacccgaagacctccggttccaagggcatgcacctggccgtggcgctggagccg accccgtccgagcgggtgtcggcgtacgccaagggcctcgcacaggaggccgagcgcgca ctcggcgacctcgccctgcaccgcatggccaaggccctgcgccccggcaaggtcttcgtc gaccacagccagaacgcggcagccaagaccaccgccgccccctacacactgcgcgcgcgg gcccggcccaccgtctcggcccccgtctcctgggaggaggtcgcggcctgccgcaccccc gaagacctggtgttcctcgccgacgacatcccgccgcggctggagcgcgacggggacctc ttcgccccgctgaccgaccccgaccgcgcccaccggctgcccgcaccccccgggggtcga ccgtga

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