Streptomyces vinaceus: CP980_11730
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Entry
CP980_11730 CDS
T06865
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03420
Nucleotide excision repair
svn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP980_11730
03430 Mismatch repair
CP980_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_11730
Enzymes [BR:
svn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP980_11730
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP980_11730
MMR (mismatch excision repair)
Other MMR factors
CP980_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEV45660
UniProt:
A0A5J6J496
LinkDB
All DBs
Position
complement(2671798..2675400)
Genome browser
AA seq
1200 aa
AA seq
DB search
MSARPSVLTDPEQLKELLGIPFTPEQLACITAPAAPQVIVAGAGSGKTTVMAARVVWLVG
TGAVAPEQVLGLTFTNKAAAELAERVRKALARAGITDPDPSPTEADAAGGEPRISTYHAF
AGQLLADHGLRIGLEPSARLLADATRFQLAARVLREAPGPYPALTKSVPDLVSDLLALDG
ELSEHLVTPAELRAYDTELLDTLAGAKLTNEDLRKVPEAVRGRLELLELTERYRTAKRSR
DLLDFSDQIALSAQLATTRPEVGELLREEFKVVLLDEYQDTSVAQRLLLSGLFGGGSGHA
VTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGRPATRFSLSENRRSGGRLLDLANELA
APLRSMHEGVEALRAAPGEERAGSVRCALLDTHAEELEWLADSVAHLVRTGTEPREIAVL
CRSARDFAQIQAVLVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLIG
PRWRIGARDLALLGRRARQLIGRTPGEVDPDERLAAAVEGVDPAEVVSLADALETFLDGS
AAASDDLPFSPEARVRFAHLAQELRDLRRSLADPLMDVLHRVLAATGLEVELSASPHALA
ARRRESLSGFLDVAAGFASLDGEASLLAFLGFLRTAVQYEKGLDHALPGGENTVKVLTAH
KSKGLEWDVVVVPDLCAGSFPKEKAPEPWTSYAKVLPYGLRGDAATLPDDPAWTSAGLKA
FKSALKEHKAVEELRLGYVTFTRPRTLLLASGHWWGPTQKRRRGPSPFLTSLHDHCAAGN
GEIEVWAPEPDADAENPSLATESTPDRSWPLPLDPESLRLRREAAALVEAHLAAPGPAPA
PEAYLWPPHCEDPSYAEEPDGGDLWAADAATVPHPRTGEGLRAEEPWAEDPWGEDPWPED
PWAEEPTPGPTAGDPRAEEPASGPTPPPGVPAPYDGGAGHRPGPPPGDRPRTPRTGARSG
LTPEEARAVASWDRDLEALEGELLRARVAVRDVELPAALSASQLLRLAADEEGFARDLAR
PMPKPPQPAARQGTRFHAWVESRFDELPLPLLDVLDPATELPGSDQDIVDEADLDSLKAA
FERSEYADRTPYRMEAPVQLTLAGRVIRGRIDAVYRGEDGSYEIVDWKTGRTTEADPLQL
AVYRLAWAEATGTPLDRVTAAFLHVRSGRVIRPRDLPGRDRLERILQGKTDTDSDQHPGS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcgcgtccgtccgtcctcaccgaccccgagcagctcaaggagctcctcggcatc
cccttcacgcccgaacagctggcctgcatcaccgcccccgccgccccccaggtcatcgtg
gccggcgccggctccggcaagaccaccgtcatggccgcccgcgtcgtctggctggtcggc
accggagcggtcgcccccgagcaggtcctcggcctgacgttcaccaacaaggccgccgcc
gagctcgcggagcgcgtgcgcaaggccctggcgcgggccggcatcacggacccggaccct
tcgccgaccgaggccgacgcggccggcggcgagccgcgcatctccacgtaccacgccttc
gccggccagctcctggccgaccacggcctgcgcatcgggctggagcccagcgcccgcctc
ctcgccgacgccacccgcttccagctggccgcgcgcgtgctccgcgaggcgcccggcccg
tacccggcgctcaccaaatccgtccccgacctggtcagcgacctgctcgcgctcgacggg
gaactctccgagcacctggtgaccccggccgagctgcgcgcgtacgacacggagctcctc
gacaccctcgcgggcgccaagctcaccaacgaagacctgcgcaaggtccccgaggccgtg
cgcggccgcctcgaactgctggagctgaccgagcgctaccgcaccgccaaacgctcccgc
gacctgctcgacttcagcgaccagatagccctctccgcgcagctcgccaccacccggccc
gaggtgggggagctgctgcgcgaggagttcaaggtggtcctgctcgacgagtaccaggac
acctcggtggcccagcggctgctgctgtccggcctgttcggcgggggcagcggacacgcg
gtgaccgccgtcggcgacccctgccaggcgatctacggctggcgcggcgcgtccgtggcc
aacctggacgacttccccgagcacttcccgcacgccgacgggcgcccggcgacgcggttc
tcgctgagcgagaaccggcgcagcggcggccgcctcctcgacctggccaacgagctggcc
gcgccgctgcgctcgatgcacgagggcgtcgaggccctgcgggcggcgccgggggaggag
cgggccggctccgtgcgctgcgcgctgctggacacccacgccgaggagctggagtggctg
gcggactcggtcgcgcacctggtccgtacggggaccgagccgcgcgagatcgcggtgctg
tgccggtcggcccgggacttcgcgcagatccaggccgtcctggtggcccgggacgtgccg
gtggaggtcgtcgggctgtccggactgctgcacctgccggaggtcgcggacctggtcgcg
gtgtgcgaggtgctccaggacccgggggccaacgcctcgctggtccggctgctcatcggc
ccgcgatggcggatcggcgcgcgcgacctggccctgctggggcgccgggcacggcagctg
atcggccgtacgccgggcgaggtggatccggacgagcggctcgcggcggcggtggagggc
gtggacccggcggaggtcgtctccctggcggacgcgctggagacgttcctcgacggttcc
gcggccgcctccgacgacctcccgttctcccccgaggcccgggtccgcttcgcgcacctg
gcccaggaactgcgcgacctgcggcgttcgctcgcggacccgctgatggacgtactgcac
cgggtgctggccgcgaccggcctggaggtggagctgtcggcctcgccgcacgcgctggcg
gcccggcgccgcgaatcgctgtccggcttcctggacgtggcggccggcttcgcctccctg
gacggggaggcgtccttgctggccttcctcggtttcctgcgcacggcggtccagtacgag
aagggcctggaccacgcgctgcccggcggggagaacacggtgaaggtgctcaccgcccac
aagtccaaggggctggagtgggacgtggtggtggtcccggacctgtgcgccggctcgttc
ccgaaggagaaggccccggagccgtggacctcgtacgcgaaggtcctgccgtacggactg
cgcggtgacgcggcgaccctcccggacgacccggcgtggacctcggcgggcctgaaggcg
ttcaagtccgccctgaaggagcacaaggcggtggaggaactccgcctgggctacgtgacg
ttcacccgcccccgcacgctcctgctggcgtcggggcactggtggggcccgacgcagaag
aggcgccggggtccgtcgccgttcctgacctccctccacgaccactgcgcggcgggcaac
ggggagatcgaggtctgggcgcccgagccggacgccgacgcggagaacccgtccctcgcc
acggagtccaccccggaccggtcctggcccctgcccctggacccggaatccctccggctg
cgccgcgaggcggcggccctcgtcgaagcccacctggccgctcccgggccggccccggcc
ccggaggcctacctctggcccccgcactgcgaggacccgtcgtacgccgaggagccggac
ggaggcgacctctgggcggcggacgcggcgaccgtcccgcacccccgcaccggtgaaggc
ctccgggccgaggagccctgggccgaggacccgtggggcgaggacccgtggcccgaggac
ccctgggccgaggagccgacgcccggcccgacggccggggacccccgggccgaggagccg
gcgtccggcccgaccccgccgcccggggtccccgccccgtacgacggcggcgccggccac
cgccccggtccgccgcccggcgaccggccccgcaccccccgtacgggcgcccgcagcggc
ctcacccccgaagaggcccgcgccgtcgcgtcctgggaccgggacctcgaagcgctggag
ggcgagctcctgcgggcccgcgtcgccgtgcgcgacgtcgagctgccggccgccctctcc
gccagccagctcctgcgcctcgccgccgacgaggagggcttcgcacgcgacctcgcccgc
cccatgcccaagcccccgcagcccgcggcgcgccagggcacgcgcttccacgcctgggtc
gagtcccgcttcgacgagctcccgctgccgctcctcgacgtcctcgaccccgcgaccgag
ctgcccggctccgaccaggacatcgtcgacgaggccgacctcgactccctcaaggcggcc
ttcgagcgcagcgagtacgccgaccgcaccccgtaccggatggaggcgcccgtccagctc
acgctcgccggccgcgtcatccgcggccggatcgacgccgtgtaccgcggcgaggacggc
tcgtacgagatcgtcgactggaagaccggccgcaccaccgaagccgacccgctccagctc
gccgtgtaccgcctcgcctgggcggaagccaccggcacgcccctcgaccgggtcaccgcc
gccttcctccacgtccgctccggccgcgtgatccgccctcgcgacctgcccggccgggac
cgtcttgagcggatcctccaaggcaaaacggacacggacagtgaccagcaccccggcagt
tag
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