Streptomyces vinaceus: CP980_13730
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Entry
CP980_13730 CDS
T06865
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP980_13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svn03021
]
CP980_13730
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_13730
Enzymes [BR:
svn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP980_13730
Transcription machinery [BR:
svn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP980_13730
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP980_13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QEV46016
UniProt:
A0A5J6JE21
LinkDB
All DBs
Position
complement(3114596..3115618)
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEYRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRVDGVL
HEFTTVPGVKEDVTDIILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQLGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccttcgctgaccgaagaggtcgtcgacgagtaccgctcgcgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactcgcttcgccgt
acgctcctgtcctcgatcccgggtgccgctgtcaccagcatccgcgtggacggcgtcctg
cacgagttcaccaccgtgcccggtgtgaaggaagacgtcaccgacatcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgccgacatcgcgcccccggccggtgtcgaggtgcacaac
ccggacctggtcctcgccacgctcaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcagctgggccaggagatcggc
cgcatcccggtcgactccatctacagcccggtcctcaaggtcacctacaaggtcgaggcg
acccgagtcgagcagcgcaccgacttcgacaagctcatcgtcgacgtcgagaccaagcag
gccatgcgcccgcgcgacgccatggcgtccgccggcaagaccctggtcgagctgttcggt
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctcgagctcaccgttcggtcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtcgcccgctccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgacccgaccgccgcc
gccgacgccttcggcgccgacgacgacgcggacgccggtttcgtcgagaccgagcagtac
tga
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