| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
svn Streptomyces vinaceus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:svn00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP980_13960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:svn03021]
CP980_13960
03400 DNA repair and recombination proteins [BR:svn03400]
CP980_13960
Enzymes [BR:svn01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP980_13960
Transcription machinery [BR:svn03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP980_13960
DNA repair and recombination proteins [BR:svn03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP980_13960
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3151174..3155073)
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| AA seq |
1299 aa
MLDVNFFDELRIGLATADDIRTWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITFVDDERRTRDLPSLEAHVSVERQQIENRRDADLEGRAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTSNSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEAIMAFDAGELALQSSVDIRFPVGTIPPRGWVPPVAEEGEQEFQPGDSFRLK
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAISDVVVPEAKKAIVAGYEAMDEKVQKQYERGLITKDERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLT
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLKIAVRG
EDGVLRKADDVETSVYARMLAEDVVIDGKVIAPANVDLGDVLIDALVANGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKIVITPDDGSDETAFPISKRAKV
IVHEGDHVEVGQKLTAGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLARYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNG |
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| NT seq |
3900 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgacgagctgcggatcggccttgccaccgcggacgacatc
cgaacctggtcgcacggcgaggtcaagaagccggagaccatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgtggcgtc
gaggtcacgcgcgccaaggtgcgtcgtgagcggatgggccacatcgagcttgccgctccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcctgggctacctgctggacctc
gcgccgaaggacctcgaaaaggtcatctacttcgccgcgtacatgatcacgttcgtggac
gacgagcgccgcacccgcgacctcccgtcgctggaggcccacgtctccgtcgagcgccag
cagatcgagaaccgccgtgacgcggacctcgaaggccgtgccaagaagcttgagaccgac
ctggccgagcttgaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgaaggc
gccgagcgcgagatgaagcagctccgtgaccgcgcccagcgcgagatcgaccgtctggac
gaggtctggaaccgcttcaagaacctcaaggtccaggacctggagggcgacgagctgctc
taccgcgagctgcgcgaccgcttcggtacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgcctggagtccttcgacctggaggaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccagcaacagccccaagggcatggttctggactgcgtgccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgccttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggccgtcgacgcc
ctgttcgacaacggccgtcgtggtcgcccggtcacgggccccggcaaccgtccgctgaag
tccctgagcgacatgctcaagggcaagcagggtcgattccgtcagaacctcctcggcaag
cgcgtggactactccgcgcgttccgtgatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgccgaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggcgaagcgcatggtcgagcgcggccgc
acggtcgtgtacgacgtgctcgaagaggtcatcgccgagcacccggtcctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccccagctggtcgaaggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgaagccggccgacggccgtccggtcacgatgccgacccaggac
atggtcctcggtctgttcttcctgaccaccgacggtgagctccgtgacaccaagggcgag
ggccgcgcgttcggctccacggccgaggcgatcatggcgttcgacgccggcgagctcgcg
ctgcagtcgtccgtcgacatccgcttcccggtgggcaccatcccgccgcgcggctgggtg
ccgccggtcgccgaagagggcgagcaggagttccagccgggcgacagcttccgcctgaag
acctcgctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgagatcgtcaacgacctggcggagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttccactgggcgacc
cgttcgggcgtcaccgtggccatctccgacgtcgtcgtgcccgaggccaagaaggccatc
gtcgcgggctacgaggcgatggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtt
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcgacagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgaaaccatcccgcgtccgatcaaggcgtccttccgtgagggcctcacc
gttctggagtacttcatctccacgcacggtgcccgtaagggtctggcggacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatc
atccgcgaggaggactgcggcaccgagcgcggcctgaagctgaagatcgccgtccgcggc
gaggacggcgtgctgcgcaaggccgacgacgtcgagacgtccgtctacgcccgcatgctg
gccgaggacgtcgtcatcgacggcaaggtcatcgcgccggccaacgtcgacctcggtgac
gtcctgatcgacgccctggtcgccaacggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggacgctcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacg
cagggtctgccgcgtgtcgtcgagctcttcgaggcccgtaccccgaagggtgtcgccccg
atctccgaggccgccggccgcgtgcggatcgaggagaccgagaagacgaagaagatcgtc
atcacgcccgacgacggcagcgacgagacggcgttcccgatctcgaagcgcgccaaggtc
atcgtgcacgagggcgaccacgtcgaggtgggccagaagctcaccgcgggtgccaccaac
ccgcacgacgtgctgcgcatcctcggccagcgtgccgtccaggtccacctggtcggcgaa
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctcctgccg
ggcgagctcgtcgagcgctcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gaatcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggatgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctcgcccgctaccgcaacatccgggtcgagcccaccgaggaa
gcgaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgcccttcggc
accggctccggccaggctgtcccgctggaggactacgactacggcccgtacaacggctaa |
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