Streptomyces vinaceus: CP980_24560
Help
Entry
CP980_24560 CDS
T06865
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
svn
Streptomyces vinaceus
Pathway
svn03030
DNA replication
svn03430
Mismatch repair
svn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP980_24560
03430 Mismatch repair
CP980_24560
03440 Homologous recombination
CP980_24560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svn03032
]
CP980_24560
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_24560
Enzymes [BR:
svn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP980_24560
DNA replication proteins [BR:
svn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP980_24560
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP980_24560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QEV47831
UniProt:
A0A5J6JDP9
LinkDB
All DBs
Position
5431945..5435487
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRNKRRIQWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFRL
SSDAYAEGWLTKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKSASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYASEAGAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTKLVADQIDTEGMFTFRN
LMPKFDIPEGHTEVSWFREETMRGMHRRYPGGIPDDRMKQAEYEMDTIISMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPLTHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPNHPRYSEAGEIRSMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLALPLDDPKTFELLGRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNKQQEITPIHPDLEKPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQEGARKNGYTDQAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAYLKANYPAEYMAGLLTSVKDDKDKSAIYLNECRRMGIKVLPPNVNES
EPNFAAQGDDVILFGLTAVRNVGQNVVESIIKTRKAKGKFSSFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAHHESMIDNVVAVKRKEAEGQFDLFGGMGDEGASDEPGFG
LDVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGLEHVLSDKTDAGISQLTGGEHSDGAV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGR
LDKREDVPRLVAMEMMVPDLSSAGTNAPVVLTIPTVKVTPPMVTRLGEILRHHKGNTEVR
IKLQGPRSTTVLRLDKHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgccgttcacgcacctgcacgttcacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggtgcgtacgacttcttccattccgcccagaaggcc
ggggtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcccgccgcaacaag
cggcgcatccagtggggccagccccaccagaagcgcgacgacgtgtccggctccggcggc
tacacccacaagacgatctgggcggcgaacgccaccggcctgcacaacctcttccggctc
tcctccgacgcgtacgccgagggctggctgaccaagtggccgcgcatggacaaggagacc
atcagcaagtggtcggagggcctgatcgcctccaccggctgcccctccggcgagctccag
acgcgccttcgcctcggtcagttcgacgaggcgctgaagtcggcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctggagatcggcaagaagctcggcatcccgccgctggtcacg
aacgactcccactacacgtacgcgagcgaggccggcgcccacgacgccctgctctgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctgaagtcgaccgacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
gccaacacgaagctggtcgcggaccagatcgacaccgagggcatgttcacgttccggaac
ctgatgccgaagttcgacatcccggagggccacaccgaggtcagctggttccgcgaggag
accatgcgcggcatgcaccgccgctacccgggaggcattccggacgaccggatgaagcag
gccgagtacgagatggacacgatcatctcgatgggcttccccggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtggggccgggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgctcacccac
ggtctgatcttcgagcgcttcctgaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tcggcccgcgtgctgggctacccctacgccatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcctcgacccgaaccacccccgc
tacagcgaagcgggcgagatccgctcgatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgcccgcggtgtggagggcctggtccgccagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagacgatcaccgaccacgtgcccgtctgggtgcggcacaccgac
ggcgtcaccatcacccagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaaggggatcgacatcgatctcctggccctgccgctcgacgaccccaagaccttcgaa
ctgctcggccgcggtgacaccctcggcgtgttccagttcgacggcgggcccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaggacatctccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgccctgcgcaagaacaagcag
caggagatcaccccgatccacccggatctggagaagcccctcgaagaggtgctcgcggtc
acctacggcctgatcgtttaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactccctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcaccatcttccaggagggcgcccgcaagaacgggtacaccgaccag
gccatccaggccctgtgggacgtcctggtccccttcgccggctacgccttcaacaaggcg
cactcggccgcgtacggcctggtctcctactggaccgcctacctcaaggcgaactacccg
gccgagtacatggcgggtctgctcacctcggtcaaggacgacaaggacaagtccgcgatc
tacctgaacgagtgccggcgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcc
gagccgaacttcgcggcccagggcgacgacgtgatcctcttcggcctcaccgccgtgcgc
aacgtcggccagaacgtcgtcgagtcgatcatcaagaccaggaaggccaaggggaagttc
tcctcgttccccgacttcctggacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gagtcgctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggcctggtc
gcccaccacgagtcgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggaatgggtgacgagggcgcgagcgacgagccgggcttcggg
ctcgacgtcgagttctccgacgtggagtgggagaagtcctacctgctcgcgcaggagcgc
gagatgctcggcctgtacgtctccgaccacccgctcttcggcctggagcacgtcctctcc
gacaagacggacgccggcatctcccagctgaccggcggggagcactccgacggcgccgtc
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccaccgtcgaggacctcgccggatccatcgagtgcatgttcttccccgcg
acctaccagctcgtctccacgcagctggtcgaggacaccgtcgtcttcgtcaagggccgc
ctcgacaagcgcgaggacgtcccgcggctcgtcgccatggagatgatggtccccgacctc
tcctcggccgggacgaacgcccccgtcgtcctcaccatcccgacggtcaaggtcactcct
ccgatggtcacccgcctgggcgagatcctgcggcaccacaagggcaacaccgaggtccgc
atcaagctccaggggccccggtccaccaccgtgctgcgcctcgacaagcaccgggtccag
cccgaccccgcgctcttcggcgacctcaaggtgctcctcggaccgtcctgcctggccgga
tag
DBGET
integrated database retrieval system
