Streptomyces vinaceus: CP980_34625
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Entry
CP980_34625 CDS
T06865
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
svn
Streptomyces vinaceus
Brite
KEGG Orthology (KO) [BR:
svn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svn03032
]
CP980_34625
03400 DNA repair and recombination proteins [BR:
svn03400
]
CP980_34625
Enzymes [BR:
svn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CP980_34625
DNA replication proteins [BR:
svn03032
]
Prokaryotic type
DNA Topoisomerases
CP980_34625
DNA repair and recombination proteins [BR:
svn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP980_34625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QEV49489
UniProt:
A0A5J6JEW7
LinkDB
All DBs
Position
7609800..7610897
Genome browser
AA seq
365 aa
AA seq
DB search
MRLRTSDVAGPGWRRLRHGRGFRYLDTDGRPLAPADRDRARALAVPPAWKDVWICPWPNG
HIQAVGTDEAGRRQYIYHPAFRAQQDAAKHAHVQNVARVLPALREQVERDLSGRGLTRVR
VLACLTRLLDLGFLRIGGERYTRDNGSFGLTTLLRKHARCRNGEVHLHFPAKSGKTVTRA
LVDEQAYAVVRALLRRKDPGPRLFAYWERGAWHEVRAEELNAYLRERAGQDVTAKDFRTW
YATVLAAVALGVSDGTSHASRGRRGTVVARAVREVSGYLGNTPAVCRASYIDPRVIELYE
DGKTVAPALDSLGENGLFGRPATHGPVEEAVLELLRDGRVGTVGSSGAAGAASRRAPSRP
RPSGS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
gtgcgactgcgtaccagcgacgtggcggggccgggatggcgcaggctgcgccacggccgc
ggcttccgctacctggacacggacggacggccgctggccccggcggaccgggaccgggcg
cgagccctcgcggtcccgccggcgtggaaggacgtctggatctgtccttggcccaacggc
cacatccaggcggtcggcaccgatgaagccggccgacgccaatacatctaccacccggca
ttccgtgcgcagcaggacgccgccaagcacgcgcacgtccagaacgtggcgcgtgtgctg
cccgcactgcgggaacaggtggaacgcgacctttccggccggggtctcacccgtgtgcgc
gtcctcgcctgcctgacccggctgctcgatctgggattcctgcggatcggcggtgaacgc
tacacccgggacaacggcagcttcggactgaccaccctgctgcggaagcacgcgcggtgc
cgcaacggcgaggtccacctgcacttccccgccaagtcggggaagaccgtgacccgtgcg
ctggtggacgagcaggcgtacgccgtcgtgcgggcgctgctcaggcgcaaggatccgggg
ccgcggctgttcgcgtactgggagaggggggcctggcatgaggtccgggccgaagagctg
aacgcctacctgcgggaacgggcggggcaggacgtgacggcgaaggacttcaggacgtgg
tacgcgacggtcctggctgcggtggccctgggggtgtcggacggcacgtcgcacgcttcc
cgcggccggcgcggcaccgtcgtggcgcgcgccgtgcgcgaggtgagcggttacctgggg
aacacccccgcggtgtgccgagcctcctacatcgacccgcgcgtcatcgagctctacgaa
gacggcaagaccgtcgcgcccgccctggactcactgggcgagaacggcctgttcggccgt
ccggcgacgcacggcccggttgaggaagccgtcctggagctcctgcgggacggccgggtg
ggaacggtcggttcctcgggggcagccggtgcagcgtcacgtcgtgcaccgtcccgtccg
cggccgtcagggtcatga
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