Shewanella violacea: SVI_0172
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Entry
SVI_0172 CDS
T01206
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_0172 (dinF)
Transporters [BR:
svo02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
SVI_0172 (dinF)
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Gene cluster
GFIT
Motif
Pfam:
MatE
Polysacc_synt
Motif
Other DBs
NCBI-ProteinID:
BAJ00143
UniProt:
D4ZDM1
LinkDB
All DBs
Position
complement(205929..207266)
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AA seq
445 aa
AA seq
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MTPVELIRNKQKNRQLLALALPMILSNITVPLLGLVDTAVVGHLSNAYYLGGVAVGSTII
TLILWMLGFLRMATTGLVAQSYGAGDTQAQYKLLLQASSLALILGLSAVLLQLPILNTAL
MLTDASLEVQRYTREYFEIRIWSTPFALLNLVLLGWLLGRQQPKAAMWQLIVANLANIGL
DLLFVLGLGWGVQGAALASVFADMSGFMVALTMVYKQVQKTGGFDFLKLYKSLSLSSYHK
LLSLNADIFVRSLCLQIAFAFMTFHGAGLGDNTVAANVILLNLLLLISYALDGIAYYAEA
EVGKAYGQRNKTLMREAVTLAWFWSAISALLFTLVFAFGGESIIKMLTNIEEVRSVADEY
LFWIVLLPILSFGSYLFDGVYIGAAKGKVMRNSMIISTFGVFFPVWFFLQDSGNHALWAA
MSCFMLARSITLTLHYRYKLKDADF
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgtcgaacttattcgtaacaaacagaaaaacagacagctactggcactcgcc
ctacccatgatattgtccaatatcacagtacccctgctgggtctggtggacacagctgtc
gtgggccatctaagcaatgcttattacttagggggggtcgccgtcgggtcaacaattatc
accctaattctttggatgctgggctttcttcgtatggcaaccacaggactcgtcgcccag
tcttatggtgcaggagacacacaagcccaatataaattactgctacaagccagcagttta
gcgcttattttagggttaagcgcggtacttctgcaacttcccatactcaatactgccctg
atgctcacagatgcaagtctagaagtgcagagatatacccgggaatattttgaaataagg
atctggtctactcccttcgccctgctcaatctggtgctattaggctggctacttggcagg
cagcaacctaaggccgccatgtggcaattaatcgtcgctaacctagccaatattggcctg
gatctgctatttgtcctagggctaggatggggcgttcaaggggcggctctagcctctgta
tttgccgatatgtccggatttatggtggccttaaccatggtctacaaacaagttcaaaaa
accggtggcttcgatttccttaagctttacaagagcctcagcctaagtagctaccataaa
ctcctcagcctcaatgccgacatattcgttcgtagcctctgcttgcaaatagccttcgct
tttatgacgtttcatggcgccggtctgggtgacaatacagtcgcagccaacgtaatatta
ctcaacctcttactgctcatcagctatgcccttgatggcatagcctattacgccgaggcc
gaagtcggtaaggcctatggccagcgaaataagacattgatgcgagaagccgtcactctg
gcctggttctggtcggccatttcggctctcttgttcaccttagtgtttgccttcggcgga
gaaagtatcatcaagatgctaaccaacattgaagaggtgcgttcggtggccgatgaatat
ctattttggattgttttactgccaatcctatcctttggctcttatctcttcgatggcgtg
tacataggggctgccaagggtaaggtaatgcgaaatagcatgattatctcgacatttggc
gtgttttttccagtatggtttttcctgcaagacagtggcaaccatgcactatgggccgca
atgagctgctttatgctagccaggagcataaccctgacactgcattatcgttataagctg
aaagatgcagacttctag
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