Shewanella violacea: SVI_0257
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Entry
SVI_0257 CDS
T01206
Symbol
pilB
Name
(GenBank) type IV pilus biogenesis protein PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svo02044
]
SVI_0257 (pilB)
02035 Bacterial motility proteins [BR:
svo02035
]
SVI_0257 (pilB)
Secretion system [BR:
svo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SVI_0257 (pilB)
Bacterial motility proteins [BR:
svo02035
]
Pilus system
Pilus assembly proteins
SVI_0257 (pilB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_11
AAA_14
DEAD
AAA_29
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BAJ00228
UniProt:
D4ZEJ8
LinkDB
All DBs
Position
complement(302689..304398)
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AA seq
569 aa
AA seq
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MPTTGLHLGLSTLFIRKQLLSEEQIASAIAKSRQNKQSLVSTIVSEKLISAREIAELCYE
EYGTPLLDLDEFDVASIPEDFLNKKLIEKHKCLPLFKRGNRLYIGTSDPTNITALEDFQF
SAGLHAEAILVEDDKLTKAIEKILEDDISALDISGIDESALADIEVDDPSKREEEQKSES
GDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPVNLSARISA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTIWGEKIVMRILDSSSAQLGI
EKLGYEDDQRELYEEMLEKPQGMILVTGPTGSGKTVSLYTGLNILNTEARNISTVEDPVE
INLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLS
TLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLSRRLCPECKQAEDIPEHELQRLGF
KQANIDEGITTYKPVGCDLCSGGYKGRVGIYEVMKISDEIARIIMEGGNSLQIATMAKEE
GMRDLRESGLLKVIHGVTSIAEINRVTSF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacgggtcttcatttaggtttatctacactctttattcgtaagcagttgctc
agcgaagagcagatagcttccgctatagcaaagtctcgccaaaataagcaatctctagtc
tctaccatagtctcagaaaagctcatttctgcacgagaaatagccgagctttgttacgaa
gaatacggcactcccttgctagatctcgacgaattcgatgtcgccagcattcccgaagac
ttcctcaataagaagctgatagagaaacataaatgcctgccactgtttaagcggggcaac
cgcctctatatcggcacctcagacccaactaacattaccgccctggaagactttcagttt
agcgctggcctacatgccgaagccatattggtcgaggatgataagcttactaaggccata
gagaagattctcgaggatgacatctcggcgctggatatcagcggcatagatgagtcggct
cttgccgatatcgaagtcgatgaccccagtaagcgtgaggaagagcaaaaaagcgaaagc
ggtgatgatgcgccgatcgtcatctatatcaacaaaatattgaccgacgctatacgcaaa
ggggcatcggatctgcatttcgaaccctatgagaaacgttaccgtatacgttttcgtatt
gacggtatcttgcatgaagtctctgagcccccagtcaatctttcagcccgaatttccgcc
cgcctcaaggtgatgtctaagctagatatagccgaacgtcgtgtgccccaagacggccgc
atcaagatgaagctatcgcgcactaagtccatagactttcgtgtcagtaccttgcctact
atctggggcgagaagatagtgatgcgtattctggactcctcttcggcgcaactaggcatc
gagaagctgggttatgaagacgatcagcgcgagctgtacgaggagatgctggaaaaacct
cagggtatgatcctggtcactggccctactggctcgggaaaaacagtctctctctatact
ggtctcaacatactcaataccgaagctagaaacatctctaccgtcgaagacccggtggag
ataaacctcgaaggggtcaatcaggttcatatcaatctcaaggcggggctgacatttgcc
tctgcattgcgctcatttctgcgccaagatcccgatgtggtcatggtcggtgagattcga
gacttagagaccgccgaaattgctatcaaggcggcgcaaacaggccacctggtattgtcg
acgctgcacactaactcggccgccgaaacactgactcgactcatcaatatgggcgttcct
ggatacaacatagctagttcggtaaacctaatcatagctcagcgcctgtctcgacgcctc
tgccccgaatgtaagcaagcagaagatatccctgaacacgaactgcagaggttaggcttt
aagcaagcaaacatagatgaaggcatcaccacctataaaccagtgggctgcgatctctgc
tccggcggttacaagggccgggtcggcatctatgaggtgatgaagatatcagatgagata
gcccgcatcatcatggaaggaggcaactccttacagatagccaccatggccaaagaagaa
ggcatgcgagatttacgagagtcggggctactcaaggtcatccatggtgtcaccagcatc
gccgagatcaatcgagtcactagtttctaa
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