Shewanella violacea: SVI_0276
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Entry
SVI_0276 CDS
T01206
Symbol
argS
Name
(GenBank) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_0276 (argS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_0276 (argS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_0276 (argS)
03029 Mitochondrial biogenesis [BR:
svo03029
]
SVI_0276 (argS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
SVI_0276 (argS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SVI_0276 (argS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SVI_0276 (argS)
Prokaryotic type
Other AARSs
SVI_0276 (argS)
Mitochondrial biogenesis [BR:
svo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SVI_0276 (argS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1
tRNA-synt_1g
Motif
Other DBs
NCBI-ProteinID:
BAJ00247
UniProt:
D4ZEL7
LinkDB
All DBs
Position
complement(332460..334205)
Genome browser
AA seq
581 aa
AA seq
DB search
MKSHIQSLLIQALDVLKQQEVIPTDFEARIQVDRTKDKTHGDFATNLAMMLTKTARKNPR
EIAQLIIDSLPQDSQVAKVEIAGPGFINFFIDENALANQLMAALKDDHLGISLPEQQTIV
VDYSSPNLAKEMHVGHLRSTIIGDSVVRALEFQGHKVIRQNHVGDWGTQFGMLLAYMEEL
RAKNGEQAQMELSDLETFYRAAKVRFDESEEFAVRARKLVVSLQSGDEYCNKLWREFNDI
SLNHCHDVYARLGVSLTREDVRGESAYNADLVEVVKELDTQGLLSESNGAKVVFQDEFKN
KEGDPLPVIIQKADGGYLYATSDMAAMSYRSKVLNADRVLYFVDLRQALHFQQVFKLARK
ANFVRPELSLEHMGFGTMNGADGRPFKTRSGGVVKLVDLLAEADIRALELVRSKNPDMDE
AELEKIAKVVGISSVKYADLSKNRTSDYIFSFEQMLSFEGNTAPYLLYAYTRVIGIFKRA
EDIDLSQAKILLEHDKEKNLGNKLAQFGEVLSRMVSKGQPHAMCAYLFELAGAFSSFYEA
CPVLAAETEEQKKSRLLIAKLTAKTLKQGLDLLGIETLDRM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacatattcaatctttgctcatccaagccctcgatgtccttaaacaacaagag
gtaatccccactgattttgaagctcgaattcaggtggaccgaaccaaagataaaactcat
ggtgatttcgctactaacttggcgatgatgctgactaaaacagcccgtaagaatcccaga
gaaatagctcagttaattatcgatagcctgcctcaagacagtcaggtggcgaaagttgag
atagcgggtcccggatttatcaacttcttcatcgatgaaaacgctttagccaatcaactc
atggcagcactaaaggatgaccacttaggcatcagtctgcctgagcagcaaaccatagtt
gtcgattactcttcgccaaacttagctaaagagatgcatgttggccatctacgttcgacc
attattggtgacagtgtagtacgcgccctggaatttcaaggccacaaggtcatacgtcaa
aaccatgtgggtgactggggaactcagttcggcatgctactggcttatatggaagagcta
cgcgctaaaaatggtgagcaagctcagatggaattgtctgatctagagaccttctatcgc
gccgctaaagtacgtttcgacgagtctgaagaatttgcagtccgcgcccgtaaacttgta
gtatcactgcaatctggcgatgagtattgcaacaaactttggcgcgaatttaacgacata
tctcttaatcattgtcatgacgtttatgcacgtttgggcgtcagcctgacccgtgaagat
gtgcggggcgagagtgcttacaacgcagatctggttgaagtggttaaggagctagataca
caaggactcttgtctgagagtaacggcgctaaagtcgtctttcaggatgaattcaagaat
aaagagggcgaccctctacccgttatcatacaaaaagcagacggcggttacctgtatgct
accagtgatatggcggccatgagctaccgctccaaggtgcttaatgctgatagggtgctc
tattttgtcgatctacgtcaggcgctacacttccagcaagtctttaaattagcccgtaag
gcaaactttgttcgtccagaactcagtttagagcatatgggtttcggtaccatgaatggt
gcagacggtcgcccgtttaagactcgctccggtggtgtggttaaactagtcgacctgctg
gccgaagccgatatccgcgcattggaactggttcgcagcaagaatccagatatggatgag
gctgagctagagaagatagctaaagttgtcgggatcagctcggtcaaatatgccgatctg
tctaagaaccgtaccagcgattacatcttcagcttcgagcagatgctcagcttcgaaggt
aatacagccccttacctactctatgcttacactcgtgtcataggtatctttaaacgtgcc
gaagatatagacctaagccaagctaagatccttctagagcacgacaaagagaaaaattta
ggcaataaactcgctcagtttggtgaagtcctgtctcgcatggtatcaaagggccaaccc
catgccatgtgtgcttatctgtttgaacttgccggcgccttctctagcttctatgaagcc
tgcccggttctggcagctgaaactgaagagcagaagaagagtcgcctgctcatagcaaaa
cttacggctaaaacacttaagcaaggtcttgatctgcttggtatcgaaaccttagaccgc
atgtaa
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