Shewanella violacea: SVI_0347
Help
Entry
SVI_0347 CDS
T01206
Name
(GenBank) sensory box/GGDEF family protein
Organism
svo
Shewanella violacea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS
PAS_8
PAS_4
RNA_binding
Motif
Other DBs
NCBI-ProteinID:
BAJ00318
UniProt:
D4ZET8
LinkDB
All DBs
Position
complement(412921..413865)
Genome browser
AA seq
314 aa
AA seq
DB search
MNELHWLIDMVQTIEVGLVVLDKNFDIQLWNGFMENHSGVSPNSIKGSNLFEQFDYLPAD
WLKQKMESVFLLKNRAFISWEQRPYVFKFKNYRPITGRADFMYQNVTLLPLSSLTGQITH
ISMIVYDVTDVAINKLQLKSVNERLEHLSQTDGLTQLHNRRYWQICMQKEFDRHARYGDE
TSLVMFDIDHFKKVNDTYGHMAGDKVIQHISHLLSQSLRETDCAGRYGGEEFAVVLVKTS
AEDALKFAERLRNKIETTELVYEGKPIKVTVSMGISDLQDRVGNSGQWLSFADQALYKAK
EAGRNKCLIYKSKA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactacactggttaatcgatatggttcaaaccatagaagttggcttggtagtt
ttagataagaactttgatatccagctttggaatggcttcatggagaaccatagcggagtg
tcccctaactcaatcaaggggtctaatctgtttgaacagttcgactaccttcccgctgac
tggctgaagcagaagatggaatcggttttcttactcaagaaccgggcattcatcagctgg
gagcagagaccttatgtatttaaatttaagaactatcgtcccattaccggacgagcagat
tttatgtaccagaatgtcactctgctgcctctatcctctctcacgggacagatcactcac
atcagcatgatcgtttacgatgtgaccgatgtagccatcaacaagttgcaattaaaatcc
gtcaatgaacgcttagagcatttaagccagaccgatgggttaactcaacttcataaccgc
agatactggcaaatatgcatgcagaaagagttcgatcgccacgctcgttatggcgacgaa
acgagtctggtcatgttcgatattgatcacttcaagaaggttaacgatacctatggccat
atggcaggcgataaggtgatccagcatatctctcatcttcttagccagtctctacgtgag
acagattgtgcgggtcgatatggtggcgaagagtttgctgtggtcctggtaaaaaccagt
gcagaagatgcgcttaagttcgccgaacgcttacgtaataaaattgaaaccacagaactg
gtttatgaaggcaagcctatcaaggtcaccgtcagcatggggatcagcgatctacaagat
cgagtcggcaacagtggccaatggttatcatttgccgatcaagcactctataaagctaaa
gaggctgggcgaaacaagtgtttgatctataagtctaaggcataa
DBGET
integrated database retrieval system
