Shewanella violacea: SVI_0366
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Entry
SVI_0366 CDS
T01206
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svo
Shewanella violacea
Pathway
svo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SVI_0366 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svo03019
]
SVI_0366 (groEL)
03110 Chaperones and folding catalysts [BR:
svo03110
]
SVI_0366 (groEL)
03029 Mitochondrial biogenesis [BR:
svo03029
]
SVI_0366 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svo04147
]
SVI_0366 (groEL)
Enzymes [BR:
svo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SVI_0366 (groEL)
Messenger RNA biogenesis [BR:
svo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SVI_0366 (groEL)
Chaperones and folding catalysts [BR:
svo03110
]
Heat shock proteins
HSP60 / Chaperonin
SVI_0366 (groEL)
Mitochondrial biogenesis [BR:
svo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SVI_0366 (groEL)
Exosome [BR:
svo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SVI_0366 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SVI_0366 (groEL)
Exosomal proteins of breast cancer cells
SVI_0366 (groEL)
Exosomal proteins of colorectal cancer cells
SVI_0366 (groEL)
Exosomal proteins of bladder cancer cells
SVI_0366 (groEL)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2868
Motif
Other DBs
NCBI-ProteinID:
BAJ00337
UniProt:
D4ZEV7
LinkDB
All DBs
Position
440262..441902
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVILDKSFGAPLITKDGVTVAKDI
ELEDKIENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELKNLSQECSDSQAITQVGTISANSDETIGQIIATAMDRVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPYILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGNGEESQIKARVSQIKIQAEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIADIEVLNEDQKHGVVIAIRAMEAPLRQIAANAGEEGSVVANNVKNGTGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMIADVPQDASAPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtattatttggtaacgacgcacgtgtaaaaatgcttgcgggcgta
aacattctggcaaacgcagttaaagtcactttgggccctaagggtcgtaacgtaattctg
gataagagtttcggcgcaccactgatcaccaaagatggtgtcacagtggctaaagatatc
gaacttgaagacaagatcgagaacatgggcgcacagatggttaaagaagttgcttctaaa
gccaacgacgaagccggtgacggtaccactaccgctaccgttcttgctcaagcaattgtt
aacgaaggccttaaagccgtcgctgctggcatgaacccaatggatcttaagcgcggtatc
gacaaggctgtagttgccgctgttgccgagcttaaaaacctatctcaagaatgtagcgat
tctcaagctatcactcaggttggtactatctcagctaactcagacgagactatcggccaa
atcatcgcaacagcgatggatcgtgtaggcaaagaaggcgttattacagttgaagaaggt
caggctctggaaaacgagctagacgtagtagaaggtatgcagttcgatcgcggttacctg
tctccatacttcatcaacaagccagaaactggcagcgttgagctagaaagcccatacata
cttcttgtagacaagaaagtgtctaacattcgtgagctactgcctatccttgaaggtttg
gctaagactggtaagccactgcttatcgtcgccgaagacgttgaaggtgaagcactagcg
acactagtcgtaaacaacatgcgcggaatcgtgaaagttgctgccgttaaggcaccaggt
ttcggtgaccgtcgtaaggctatgctacaagatatcgctatcttgactggcggcacagtt
atcgctgaagagattggtctagagcttgagaaagcgactctagaagatcttggtacagct
aagcgcgttatcatcactaaagatgacactactatcatcgacggtaatggtgaagagagc
caaattaaggctcgcgtttcacaaatcaagatccaggctgaagagtctacatctgattac
gacaaagagaagctacaagagcgcatggctaagctagccggcggtgttgcagttatcaag
gtcggtgcagctaccgaagttgagatgaaagagaagaaggcacgtgtagaagatgcactt
cacgcgactcgcgcagcagtcgaagagggtgttgtagccggtggtggtgttgctctggta
cgtgttgctagcaagattgctgacattgaagtacttaacgaagaccagaagcacggcgta
gttatcgcaattcgtgccatggaagctcctctacgccagatcgccgctaacgcaggtgaa
gaaggttcagttgttgctaacaacgttaagaacggtactggtaactacggttacaacgca
ggtaacgacacttacggtgacatgcttgagatgggtatcctagatccaactaaagtgact
cgtagcgcgctacagtttgcagcatctattgctggtctgatgatcaccacagaatgtatg
attgccgatgtaccacaagatgcttctgcacctgatatgggtggtatgggtggtatgggc
ggtatgggcggcatgatgtaa
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