Shewanella violacea: SVI_0482
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Entry
SVI_0482 CDS
T01206
Symbol
amiB
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
svo
Shewanella violacea
Pathway
svo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SVI_0482 (amiB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
SVI_0482 (amiB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svo03036
]
SVI_0482 (amiB)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
SVI_0482 (amiB)
Peptidoglycan biosynthesis and degradation proteins [BR:
svo01011
]
Peptidoglycan biosynthesis and degradation
Amidase
SVI_0482 (amiB)
Chromosome and associated proteins [BR:
svo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SVI_0482 (amiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
BAJ00453
UniProt:
D4ZFK4
LinkDB
All DBs
Position
549233..550558
Genome browser
AA seq
441 aa
AA seq
DB search
MIKINNFIKTILVVLSLCTSFIAHSANKLDGVRVWAAPESTRIVFDLSNAPKFTHFNLAS
PHRLVVDLKGTTTSLNLGKLTNNSKLVKKVRISKSPSKGTLRIVIDLAKPVKSNLFSLPP
TAPYGDRLVVDLDDNSSTTAVVSKASKVTQKLRDVVVAIDAGHGGDDPGSIGPSGIYEKK
VVLEIAKRVAAKINATPGMKAVMTRTGDYFVNLNQRSVIARNSKADLLVSIHADAFTSSQ
PRGASVWVLSMRRANSEIGRWLEHKEKHSELLGGAGEIMKNAANEQYLAMTLLDMSMDRS
MAVSHHIADDVLSNLGKVTKLHKSKPESASFAVLKSPDIPSILVETGFISNHTEERLLSQ
RQHQNNLANAVYKGVVKYFTSNPPVNSLMASKGSRRHSVRKGESLSVIAHRYKVSITNIK
KANNLKSNNIHIGQRLVIPRA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatcaataattttataaaaactatacttgtagtgctttcactatgtacctct
tttattgcccatagtgccaataagctagatggtgtacgtgtctgggccgctcccgaatcg
actcgaatcgttttcgatctaagcaatgcacctaagtttactcatttcaatctggctagt
cctcatagactcgtggtcgacctcaagggcaccacgacctcattgaatctcggtaaatta
actaataacagtaaattggttaagaaagtaaggataagtaaatccccttcgaagggaacc
ttacgcatagttatcgatctggctaaacccgtaaaatcgaacctgttttcactaccgcct
acggctccctatggagaccgcttagtcgtggacctcgatgataatagctcaacaacggca
gttgtaagcaaggccagtaaagtcacacagaagcttagagatgtggttgtggccatcgat
gccggtcatggaggtgatgatcctggctctattgggccatcgggtatttatgagaaaaaa
gtggttctggaaatcgcaaagagagtagctgcaaaaattaatgcaacgccaggtatgaaa
gctgtgatgacccgtacaggtgattattttgtcaacctaaatcaacgctctgtgatcgca
agaaatagtaaagccgatctactggtttcaattcacgccgacgcatttacctcttcgcag
cctaggggcgcatcagtttgggtcttgtctatgaggcgtgctaacagtgagatcggtcgt
tggttagagcataaagagaagcattcagagttgttaggtggtgccggagagatcatgaaa
aatgctgctaatgaacagtatttggctatgaccttgttggatatgtccatggataggtcc
atggctgtcagtcatcatattgccgatgatgttttgtcgaacttaggtaaggtaaccaag
ttgcacaagagtaaacctgagtcggctagttttgccgtacttaagtcaccggacattcct
tcaattttggtggagacagggtttatctcgaaccatacagaggagaggctcctgtcccag
agacaacatcagaataatttagccaatgcggtatacaagggggtcgtgaagtacttcacg
tctaatccgccggttaactcactgatggcgagtaaaggttcgcgaagacacagcgtccgt
aaaggtgagtcgctctcggttattgctcataggtataaagtatcaataaccaatattaag
aaagctaataacttgaagtctaataacatacatatcggccaaaggttagtgatccccagg
gcatag
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