Shewanella violacea: SVI_0568
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Entry
SVI_0568 CDS
T01206
Symbol
htrB
Name
(GenBank) lipid A biosynthesis lauroyl acyltransferase
KO
K02517
Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:
2.3.1.241
2.3.1.-]
Organism
svo
Shewanella violacea
Pathway
svo00540
Lipopolysaccharide biosynthesis
svo01100
Metabolic pathways
Module
svo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SVI_0568 (htrB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
SVI_0568 (htrB)
Enzymes [BR:
svo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.241 Kdo2-lipid IVA acyltransferase
SVI_0568 (htrB)
Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
Lipid A
SVI_0568 (htrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
BAJ00539
UniProt:
D4ZFU0
LinkDB
All DBs
Position
complement(675660..676586)
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AA seq
308 aa
AA seq
DB search
MVEKAQFSTHLFHPKYWLLWFGVGLMRLTQLLPLSIQMKLGSLIGRLAKAVMGSRVNTAK
RNLELCFPEMSASERQDLLNRNFEETGKAIFDTINAWWWSDAKVQSHMSIKGQQHVENTL
SDGHGVILFAVHCLPLEMGARVFGQFQPGVGVYRPHNNAVMEYLQVKGRLRSNKALVSKR
DLRQMIRCLRSPDVIWYTADQDFGRSSATFIPFFAMQEAATITGATTLARLGKAKVLPFS
VVRNADDKGYTIEIMPALDNFPGENEVIDAKRGNKIIEGIINRSPSQYMWLHRRFKTRPN
QDDPSLYK
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtggtagaaaaagcccaattttcgactcatctatttcaccccaaatattggctactctgg
ttcggtgtgggtttgatgcgcctgacacagctgctgcccctatcgatacagatgaaacta
ggtagcctcatagggcgcttagcgaaagccgtcatgggcagtcgagtcaatactgccaag
cgtaatttggaactttgcttccccgagatgagcgcaagtgaacgacaagacttgctgaac
cgtaattttgaagagaccggtaaggccatcttcgataccatcaatgcctggtggtggtcc
gatgccaaagtgcaaagccacatgagcatcaaaggccagcaacatgtcgaaaacacactc
tctgacggccatggcgttatcctgttcgccgtacattgcctgcccctagagatgggcgcg
agagtatttggccagtttcaacccggcgtaggtgtctatcgcccccataacaatgctgtg
atggaatacctacaggtcaagggacgtctgcgttccaataaggctctggtatctaaacgg
gatctgcggcagatgatacgttgccttcgcagtccggatgttatctggtacacggcagat
caagattttggccgctctagtgccacatttattcccttcttcgccatgcaagaagcggcg
acgatcacaggtgccaccaccttggcacgcttgggcaaggctaaggtattacccttcagt
gtggtccgtaacgccgatgataaaggctacaccatagagatcatgccagccctagataac
ttccctggtgaaaatgaggttatagatgctaagcgaggcaataagatcatcgaaggcatc
atcaatcgcagtcccagccagtatatgtggctacaccgtcgcttcaagacacgtcctaat
caggatgatccatcgctatataaataa
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