Shewanella violacea: SVI_0594
Help
Entry
SVI_0594 CDS
T01206
Name
(GenBank) GGDEF domain protein
Organism
svo
Shewanella violacea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
GGDEF
Motif
Other DBs
NCBI-ProteinID:
BAJ00565
UniProt:
D4ZFW6
LinkDB
All DBs
Position
707246..708880
Genome browser
AA seq
544 aa
AA seq
DB search
MRAFSIFSNYLVLFSILVGIILSGGLGYSFYQNETQAIESDFRRDVDDKAAALERELLIN
LEVLYAVKGLFNSSDDVNEAEFKQLASSFLVRHQNIQALEWIPRVSLEQRDKYEQQRRKF
YPDFEFTEREFQGSMIRATDRKEYFPVYYVEPMEGNEVAFGFDLASNPKRDKILKKSRDL
DLALATASITLVQEVSNQKGFLMFMPIYLGDPNTLIKRREQLTGFVLGVYRIGDMFETAI
RYTGAQGINLKLIDNTSISAEQLYSSYATEQHQDKTQLKLIYNKPLSRFGGRQWTLVATP
SLGYIAERRSLLPFISCAFGVLFVLLAGAYISAIIRRSSLIKVEVEARTQDLNEAKLELE
QLSHTDSLTKIANRRKFDDKFEKEWQRAVRSKTSLSLIMIDIDNFKQFNDHYGHLAGDQC
LRDVAKSLQSTMSRNTDLVARYGGEEFVILLPNTNEPALLADKCLINVEKLRIPHEPSSV
SEYVTISIGVISTSPTYNSDPLALSAKVDKLLYLAKDLGKNRVCVDEPIIIPNGDVIDFK
SPNK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctttcagcatcttctctaactacctagtcctattctctatcttggttggcatt
atactttcgggtgggctcggctatagcttttatcaaaatgaaactcaggccatagagtcc
gactttaggcgagatgtcgacgataaggccgcagctttagaacgagagctcttgattaat
ttagaggtgctctatgcggttaagggcttatttaatagttcagatgatgtgaacgaagct
gaatttaaacaattggcaagtagctttttggttaggcatcagaatatacaggcattagag
tggatccccagagttagcctggaacagcgtgataaatatgagcagcagagaaggaaattc
tatcccgattttgaatttaccgaacgtgaatttcaggggagtatgatccgagcgaccgat
cgaaaggagtatttccctgtctactatgtcgagcccatggaaggcaatgaggtggcattc
ggttttgacttggcgtcaaatcctaaaagagacaaaatactcaagaagtcacgggatctg
gacctcgcactggcgacagccagtatcaccttagtacaggaagtctccaatcagaaggga
tttctgatgttcatgcctatctatctaggtgatccaaataccttaattaaacgtcgagag
caactgacaggcttcgtgcttggagtatatagaatcggcgatatgttcgaaactgcgatt
aggtatacaggggctcaaggcattaatttaaaattgatagataataccagtatctcggct
gagcaactttattcaagttatgctaccgagcaacaccaagataagacacaactaaaactc
atctacaataaacctttgagccgattcggagggcgacaatggaccttagtagccaccccg
tcacttggctatattgcagagcgcagaagcttattgccgtttattagttgtgcttttggc
gtgttatttgtactacttgctggtgcgtatatatctgccattattcgacgtagctcgctg
ataaaggttgaggtagaagcgcgaacccaagacttgaacgaagccaagttggagctagag
caattatctcatacagacagtttgaccaagattgccaatcgtcgaaaattcgatgataag
tttgagaaagagtggcagagagccgtgcgcagtaagacttcactttctcttatcatgata
gatatcgataattttaaacagtttaatgatcattatggacacttggcaggagatcaatgt
ctgagggatgtggctaagtcattgcagagtaccatgagtcgcaacactgacttagtcgct
cgttatggtggtgaagagttcgttatcttactgccaaatactaatgaacctgcgctgctt
gcggataaatgtttaatcaatgttgaaaagttacgcataccccatgaaccatccagtgtc
tctgagtatgtgaccataagtatcggggttatcagcactagccccacatacaatagtgac
cctttagcgctcagtgccaaagtggataaattattatatctagccaaagacttaggtaag
aacagagtctgcgttgatgagcccataatcatccccaatggcgatgtgatagattttaaa
tcaccaaataagtaa
DBGET
integrated database retrieval system
