Shewanella violacea: SVI_0613
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Entry
SVI_0613 CDS
T01206
Symbol
kpsM
Name
(GenBank) polysialic acid transport protein KpsM
KO
K09688
capsular polysaccharide transport system permease protein
Organism
svo
Shewanella violacea
Pathway
svo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_0613 (kpsM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_0613 (kpsM)
Transporters [BR:
svo02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Capsular polysaccharide transporter
SVI_0613 (kpsM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Form-deh_trans
DUF898
Motif
Other DBs
NCBI-ProteinID:
BAJ00584
UniProt:
D4ZFY5
LinkDB
All DBs
Position
730566..731345
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AA seq
259 aa
AA seq
DB search
MRKRSSIQIMVDTVHALMMREIKTRFGSNRLGYFWALAEPIGQVAILGLIFSLMGRSSVA
NIPIALFLFTGKLPFSLFTKLLTQITAAVESNKGLLSYRQVSAIDPVITRVLIEVATYLV
VYLIIFAFMAWLGFEVLPDDLLGVLAASGLLIIFSVGIGLIFCTAASYWKDTSKLVGMIT
MPMFFVSGIFFCATSIPPQYLYLFDWNPVFHAIELGRDASFSAYTTPIGSWLYLSLLALV
SFSLGLAMFHLSRMRFLIT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcgaagctcgatacagatcatggtcgataccgtgcacgccttgatgatgcga
gaaattaaaacccgcttcggctcgaatcgcctagggtatttctgggcgctggcggagccc
ataggtcaagtcgccattttggggctgatttttagtttgatggggcgcagtagcgtggcc
aatattcccatcgccctgtttctgtttaccggcaagctgccctttagcttgtttactaaa
ctcttgacccaaatcacggccgcggtcgaatcgaacaagggcttgcttagctaccgacaa
gtgtcggctatcgacccggttatcactcgagtgctgatagaagtggcaacctatttggtg
gtgtatctgattatttttgcatttatggcctggcttggtttcgaggtactgcccgacgac
ttgctgggagtactggccgcaagtggcttgctgattattttctccgtagggatagggtta
atcttttgtactgccgcgagctattggaaagacactagcaagctggtcggcatgatcacc
atgccgatgttttttgtctccggtatcttcttttgcgccaccagtatcccgccccagtat
ttgtatctgtttgactggaatccagtatttcatgccatagagctgggtcgtgatgcatct
tttagcgcttataccactcctatcggcagctggctgtatctcagcctattggcattagtg
agttttagcctagggctcgcaatgtttcatctaagtcgaatgaggtttctaatcacatga
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