Shewanella violacea: SVI_0628
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Entry
SVI_0628 CDS
T01206
Symbol
kpsS
Name
(GenBank) capsule polysacchride export protein KpsS
KO
K07265
capsular polysaccharide export protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SVI_0628 (kpsS)
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GFIT
Motif
Pfam:
Capsule_synth
DUF6716
Motif
Other DBs
NCBI-ProteinID:
BAJ00599
UniProt:
D4ZG00
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Position
751125..752327
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AA seq
400 aa
AA seq
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MNILFLQGPLGPFFNLLAAHFSSMGHDCHKINFNGGDKLYSGADHIVDYSGTCADWPEFL
RDYIERYKIDSIAVYGDCRLYHKAAHQVSLELGLNFWAFEEGYLRSGFVTLELGGCNANS
LLFNNIEALPQIDCQDTKNIQGVKSVGSTFGLRAWFAGRYYFAMSLSANQFASYAHHRPW
TTIEEAVFWIKSLAQKWWSKLMDPPRYRRFIRRYDGQFFLLPLQVEVDFQLRDHSRFESV
EQVIIEVLGSFSAHASSDQALLIKHHPQNRGFVHYGDLIDKLVSELGLEGRVLYGHDFNL
PDVYRHVKGVVTVNSTVGLSALLHHLPTVVLGKSIYDIHGLTYEHGLDRFWRDNYSVDQD
LFARFRTYLCLQTQVPGDFYKNSAPLVASAYQKITAQGKQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgtttttacaggggcctttagggccattctttaacttgttagcggctcat
ttctcttcgatgggtcatgattgtcataagataaattttaatggtggcgataaactctat
agcggcgccgatcatattgtcgattactcaggaacttgtgcagattggcctgagtttctc
agggactacatcgagaggtacaagatagactccatagccgtctatggcgattgccgttta
tatcataaggccgctcatcaggtatcactcgaacttgggcttaatttttgggccttcgaa
gaaggttatctgagatcaggtttcgtgaccttagagcttggaggctgtaacgccaactct
ttattgttcaacaacatagaggccttaccccagattgattgccaagataccaaaaatatt
caaggcgttaaaagcgtgggtagcacctttggtctacgagcctggttcgccggtcgttac
tattttgcgatgagtttatcggcaaaccaatttgcctcatatgctcatcacagaccttgg
accaccatagaggaagctgttttctggataaaaagtttggctcagaagtggtggtcaaaa
cttatggaccctccgcgttacaggcgttttattcgtcgctacgatgggcagtttttctta
ctgcctctacaggtggaggttgattttcagctgagggaccattcccgcttcgagtccgta
gagcaagtcatcatcgaggttctaggctcattttcggctcatgccagtagcgatcaagcc
ttgttgattaaacaccatccgcagaatcgaggcttcgttcattatggcgacttgatagac
aagttagtatccgagttaggcttagaggggcgtgtgctttatggccatgattttaatctt
ccagatgtataccgccatgttaagggcgtggtgaccgttaatagcacagtggggctctcg
gccttattgcatcatctgcctactgtggtgcttggaaaatctatctatgatatccatggc
ctcacttatgagcatggtttagaccgtttttggcgggataattacagtgtagatcaagat
ctgtttgcccgctttagaacctatctttgcctgcagacccaagtacccggtgatttttac
aagaattctgcccccttagttgcgagtgcctaccagaagatcactgcacaaggtaaacaa
taa
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