Shewanella violacea: SVI_0758
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Entry
SVI_0758 CDS
T01206
Name
(GenBank) WD domain, G-beta repeat protein
Organism
svo
Shewanella violacea
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_2nd
Beta-prop_RIG_2nd
Beta-prop_SPT8
NBCH_WD40
Pepco
Beta-prop_IFT122_1st
Beta-prop_RSE1_2nd
PALB2_WD40
Motif
Other DBs
NCBI-ProteinID:
BAJ00729
UniProt:
D4ZGD0
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Position
complement(895800..896771)
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AA seq
323 aa
AA seq
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MKSFFSVILCTLAIAACQPTAIDTQALITEPSYDASLSLNGQFVIVSTANSAIQVWDLET
RQQKYTWIHSESNNDAFDVAISPNQDFAASLSRDSVALWSMLNGSSLGWWSLPSTGQSVA
VSNSGSLLIGLTDGSVMSLMPSASTKTPSLIKFLGHSEKVNSVALSADGKLALTGSNDMQ
AILWHSTTGQPIHRWQFDNRVIKVDLNGSGSLSFIGDSTKIAKIMDNTTGELVSQLNITR
RKMNFSAVRFSNRDTLLLTGTPAREVRVWDIKTGQSLANWQVQRTKHAQTKGAVVYSVAN
LDSNQIRTISSNGLVETWPIPVH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtttcttttcggttattttgtgcactcttgctattgctgcttgccagcctaca
gccatagacacacaagcattgatcacagagcctagctatgatgccagcctgtccctgaat
ggacaatttgtcatcgtcagcactgccaatagcgcaatacaggtatgggatctcgagact
cggcagcagaaatatacctggatacatagcgagtcaaataatgacgccttcgatgtcgcc
atctcacccaatcaagattttgcagcttctttaagcagagactcagtcgcactctggagc
atgttaaacggctcatctttaggctggtggtcattgccctccaccggacaaagtgtggca
gtatctaactcagggtcattactcataggtctcaccgatggcagcgtcatgtctctgatg
ccgtcggcttctaccaagaccccttctttgataaagtttcttggccattcagaaaaagtt
aacagcgtagccctttctgccgatggaaaactcgcccttacaggctcaaacgatatgcag
gccatactgtggcactccactacaggccagccaattcatcgttggcagttcgataaccga
gtcataaaggtggacttaaatggctcagggagtctgtcatttattggtgatagcacaaaa
atagccaagattatggacaataccactggcgaattagtcagccaattaaatatcactcgt
agaaaaatgaacttttcggcggtgcgcttttcaaaccgtgatacattgcttctaacaggc
accccggcgagagaagtccgagtctgggatatcaaaacaggtcaatccttggctaattgg
caagttcagcgtaccaaacatgcccaaaccaagggcgccgttgtatactctgtcgctaac
ttggattcaaaccagatccgtaccatcagcagcaatggcttagtcgaaacttggccaata
cctgtccattag
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