Shewanella violacea: SVI_0928
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Entry
SVI_0928 CDS
T01206
Symbol
nhaR
Name
(GenBank) transcriptional activator protein NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svo03000
]
SVI_0928 (nhaR)
Transcription factors [BR:
svo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SVI_0928 (nhaR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
BAJ00899
UniProt:
D4ZGV0
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Position
1080623..1081534
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AA seq
303 aa
AA seq
DB search
MSHLNYNHLYYFWMVHKKGSVAKAAEALCLTPQTVTGQIRVLETRFKGSLFKRVGRSLEP
TELGELVFRYADKMFSLSYEMLDILNYQKDENILFEVGIADALSKALASRVLLSVVPSDG
SMHLACFEATHESLMTRLREHKLDIILSDCAGESLKYPEILSKKLGECGVAFFSSEKYSK
PFPECLEQGKLLIPGKRTSLGQQLHHWFDENGLNVNILGEFDDAAMMKAFGFFKQGIFVA
PSIYKQDILSHDMHLLGETTDIKEVYHVMFAERMIQHPAVKRLLETDFTDLFEGRDLQVQ
SLS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatctaaactataaccacctctattatttttggatggtacataaaaagggctcg
gtagctaaggctgccgaggctttatgcctcacaccacaaacagtgacggggcagattcga
gttcttgaaacgcgttttaagggcagcctatttaaacgagtaggtcgctccttggagcct
actgagcttggagaactggtatttcgctatgcggataagatgtttagtctcagctatgag
atgttagatatccttaactatcaaaaggacgagaatattctgttcgaggttggcattgcg
gatgcgctgtctaaagccttggcaagcagagtgttactctccgttgtccccagtgatggc
tcaatgcatcttgcctgcttcgaggcgacacacgaaagcctgatgacacgcttaagggag
cataaactggatattatcctatctgattgcgccggagagtcccttaaatatcctgagatc
ttatctaagaaattaggcgagtgtggggtggctttcttctcctccgagaagtacagcaag
ccgtttcccgagtgtttagagcaaggtaagctactcattcccggaaaacgaacctctctt
ggacagcagctgcatcattggttcgatgaaaatggcctcaatgtcaatatactcggtgag
tttgatgacgcggccatgatgaaggcctttggttttttcaagcaggggatcttcgtggcc
ccctctatctataaacaagatatcttgtcccatgatatgcacctgttaggtgaaaccaca
gatatcaaagaggtttatcatgtgatgtttgccgagcgcatgatccagcatcctgcggtg
aaacgcctgttagaaacagatttcactgatctgtttgaaggccgagatctacaggttcaa
agcttgtcatag
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