Shewanella violacea: SVI_0944
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Entry
SVI_0944 CDS
T01206
Name
(GenBank) toxin secretion ATP-binding protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
svo
Shewanella violacea
Pathway
svo02010
ABC transporters
svo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_0944
03070 Bacterial secretion system
SVI_0944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_0944
02044 Secretion system [BR:
svo02044
]
SVI_0944
Transporters [BR:
svo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SVI_0944
Secretion system [BR:
svo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SVI_0944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
MeaB
AAA_16
AAA_29
ABC_ATPase
PRK
AAA_18
AAA_30
AAA_22
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAJ00915
UniProt:
D4ZGW6
LinkDB
All DBs
Position
1097938..1100247
Genome browser
AA seq
769 aa
AA seq
DB search
MDSGLHSLVAIARFHQLPAEPEQLSHEFGISGTLFSDTEILLAAKALTLKAKQLTLSISE
LKNGILPAIAKDKQGGYFIIARLSSDNLSESFDPIDEQQDVSQSKAKQDNILIHDLTQGA
PRTVSVDELKQRWTGELIALVRRQGFGESLQQKFDISWFIPSLVKYRKLFGEVLIASFFL
QIFALVIPLFFQVVMDKVLVHRGFTTLDVLAVGFFVVVVFEAILGGIRNYTFSHTTNRID
VELGSRLFQHLLNLPLSYFESRQVGQNVARVRELDTIRNFITGTALTLVIDLLFVFVFLG
VMWYYSPTLTWIVMGSIPFYILLSVFITPILRRRLDEKFKHGAANTAFLTEAITGISTVK
SMAVEPQMRRKLEDHLSSYVHASFRSQNLGNIAGQIAGLINKLVTLGIIWVGAHLVIDGQ
ISVGQLVAFNMLAGRVSGPILKLVQLWQDFQQAGISIERLGDILNTPKEPGFNPNRSRLP
SLQGAITFEHVRFRYRPDGPVILNEINLQTRPGEVIGIVGRSGSGKSTITKLVQRLYIPE
SGRVLVDGVDLSMIDTAWLRKQIGVVLQENFLFNRTIRENIALTDPSISMERVVAAAKMA
GAHEFIVELPEGYDNIVGEQGSNLSGGQRQRLAIARALIGNPRILIFDEATSALDYESER
LVQDNMARICKGRTVFIIAHRLTTVRQCNRIIVMDKGRIVEQGNHDRLIAHNGYYAKLHS
YQSHTPNLHPVESNQANYSQAKQVRTTAKNNRVNTSSPSAAKHSTEEKI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggattctggtcttcattctcttgtcgctatagcgcgttttcatcagttgccagcggag
cctgagcagctgtctcatgagttcggtatatcgggcactttattttctgatactgaaata
ttgttggcggcgaaagcgctgaccctaaaagctaagcagctgactttatctatctcagag
cttaaaaacggtatcttgcctgctatagctaaagataagcaaggtggttattttataatc
gcaagattgtcatcagataatctttcagagtcttttgatccgattgatgaacaacaagac
gttagccagtctaaggcgaaacaagataatattttgatccatgatcttactcagggcgcg
cctcgaactgtatctgttgatgaattaaaacagcgttggacgggcgaactgattgcactg
gtcaggcgtcaagggtttggtgagagcctgcagcaaaagtttgatatctcttggtttatt
ccttcattagtaaaataccgaaaattgttcggagaggtgctgattgcttctttctttttg
caaatttttgccctagtcattccactcttctttcaagtggtcatggataaagttctggta
catcgtggtttcaccactctagatgtgcttgcggtaggtttttttgtagtggtggtattt
gaagccatattaggagggattcgtaattacacttttagtcatacgactaaccggatcgat
gttgaactaggttcccgcctttttcagcatctattgaatttacctttatcatattttgag
tccaggcaggtcggtcagaatgtggctagagtcagagaacttgataccatacgtaacttc
ataacggggacggctctaacgttagtgatagaccttctgttcgttttcgttttcttaggt
gtgatgtggtactacagcccgacgcttacctggatagtgatgggcagtattcccttctat
attctgttatctgtgtttataacccctattttacgacgtcgtctcgatgagaagttcaag
catggcgcggctaataccgcttttttgaccgaggctattaccggaattagtaccgttaag
tcgatggcggttgaacctcagatgcgacgtaaattagaagatcacttatccagttatgtg
catgcttcttttcgaagccaaaacctaggtaatatagctggacaaatagcgggacttatt
aataaattggtcaccttaggcattatttgggtgggggcgcatttagtcatagatggccaa
ataagcgtaggtcagctggttgcatttaatatgcttgcggggcgtgtcagtggacccatt
ctcaaacttgtacagctttggcaagactttcagcaggcgggaatatctatcgagcgattg
ggagatatcttgaatacaccaaaggaacctggatttaaccctaaccgatcacgtctacct
tcgttgcaaggtgcgattacttttgagcatgttcgtttccgctatcgaccagatggtccg
gttattctcaatgagataaatctgcagactcgaccaggtgaggtgataggtattgtcggg
cgttccggttcaggaaaaagcaccattactaagctggtgcaacgactctatattcccgag
tcggggagagtgctcgtggatggtgtagacctttctatgatagacacggcctggcttcgt
aaacagattggtgtggtattacaggagaattttctgtttaaccgtacgatacgggaaaat
attgccttaactgatccttctatttctatggaacgtgtagttgctgcggccaagatggca
ggtgcacatgagtttattgtcgagctaccggaagggtatgacaatattgttggtgagcaa
ggcagtaatctatctgggggacagaggcaaagattggctattgcccgtgcactaataggt
aatcctcgtattttgatttttgatgaagcgaccagtgcactggattatgagtcagaacgc
ttagtgcaagacaatatggcgcggatttgtaaggggcgtaccgtgtttattattgcccac
agactgactactgttcgtcagtgtaatcgtattattgtgatggacaagggccgtatcgta
gagcagggaaatcatgaccgcttaatcgctcacaatggttattacgccaagttgcacagc
tatcaaagtcatacgcctaatctacatccagtagaatctaatcaagctaactattcccaa
gctaagcaggtaagaactacagctaaaaataacagggttaatacatcgagcccttcagct
gctaagcatagcactgaggagaagatatga
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