KEGG   Shewanella violacea: SVI_0988
Entry
SVI_0988          CDS       T01206                                 
Name
(GenBank) OmpA family protein
  KO
K03286  OmpA-OmpF porin, OOP family
Organism
svo  Shewanella violacea
Brite
KEGG Orthology (KO) [BR:svo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:svo02000]
    SVI_0988
Transporters [BR:svo02000]
 Other transporters
  Pores ion channels [TC:1]
   SVI_0988
SSDB
Motif
Pfam: OmpA_membrane OMP_b-brl OmpA OprF DUF748 Porin_4 Opacity
Other DBs
NCBI-ProteinID: BAJ00959
UniProt: D4ZH10
LinkDB
Position
complement(1151572..1152657)
AA seq 361 aa
MKAILLTSMLPFAANAAQELTPWYVGGGLGVNNYEPNCDMKTMKSCGEDDPYAWDVFGGY
LFNDYFGVELGYRDLGRAEWVDYANKMNDVGAKGMSLGVVGFWPIANRWSLSAEAGAMNY
LISNNKEYGTEYYSDSGIAPYFGAGIGYNITENLKLQAKYRRYENLDEDKWNTLAMESNY
WGLELSYRFGTPAAVIAPIVAAIVVDSDNDGVADDMDQCADTSANHQVDANGCTVYTETT
EQRDVGSIQFANNSSAVKTESFERIEKLATYMNTNPKSTVLISGHASNVGKADYNMILSD
KRAKAVAKILVEKFGISQDRVEAKGFGVTQPIIQGRSVEANKANRRIEAQVTGVKREALI
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
ttgaaagctattctgcttacttcaatgctcccattcgctgctaacgcggcacaagaactt
actccttggtatgtaggtggcggtcttggcgtaaacaattacgagccaaactgtgacatg
aagaccatgaagagctgtggcgaagatgatccatacgcatgggacgtgtttggtggttac
cttttcaacgactacttcggagttgagctaggttaccgtgatcttggccgtgctgagtgg
gtcgattacgctaacaaaatgaatgacgttggcgctaaaggtatgagccttggagtcgta
ggattctggccaatcgctaaccgctggagcctatcggctgaagctggtgcgatgaactac
ctaatatcgaacaacaaagaatatggcactgagtattacagtgacagtggtattgcacct
tactttggcgctggtatcggttataacatcaccgaaaacctgaagcttcaagctaagtat
cgtcgttacgaaaacttagatgaagacaagtggaacacacttgccatggaaagcaactac
tggggcctagagcttagctaccgtttcggtactccagctgcagttattgcacctattgtt
gccgcaattgttgtcgattcagataacgacggcgtagctgacgatatggatcagtgtgct
gacacttctgctaatcaccaggttgatgcgaacggttgtactgtctacacagaaactacc
gagcaacgcgacgtgggttctattcagttcgcaaataactcatctgcagtaaagactgag
tctttcgagcgcattgagaagctagcaacttacatgaacactaaccctaaatcgactgtg
ttgatctcgggtcatgcttcaaatgtaggtaaagctgactacaacatgatcttatcagac
aagcgtgccaaggccgttgctaagatacttgttgagaagtttggcattagccaagatcgc
gtcgaagctaaaggcttcggtgtcacacaacctattatccaaggtagaagcgtcgaagcc
aacaaggctaaccgtcgtattgaagcccaggtaacaggcgtgaaaagagaagctttgatc
aagtaa

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