Shewanella violacea: SVI_1061
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Entry
SVI_1061 CDS
T01206
Name
(GenBank) transporter, BCCT family
KO
K05020
glycine betaine transporter
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_1061
Transporters [BR:
svo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SVI_1061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCCT
Motif
Other DBs
NCBI-ProteinID:
BAJ01032
UniProt:
D4ZH83
LinkDB
All DBs
Position
1233066..1234496
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AA seq
476 aa
AA seq
DB search
MSRESVALISCCIAAAAFLIFPETAISWVAGLTGYVIHEFGLAFIIIPSLFVILSLAIAL
SPWGKIKLGEDAKPEFGFVSWTSMLFAAGMGSGLIFWGVAEPIVHYAHPPAFVPVADIGK
DSALALTYFHWGLHAWSLYAISGLVMAWFAFNKSRPMTISASFTDKPESSRYQLFDLLAV
VAVIFGVAGTLANTIALVQSGVEQSIGSDIGGVSFRLGLLVAITLAFTLSSTMGLDKGIK
RMSLFNLLLVVVMLVAVIALVDPLSVATTVVTSTLSYLQLLPSVSFSIDMASRQWSEGWS
IIYFVWWIAWAPFVGPFIARISRGRTIRQYLLCTILIPTMTSIVWFSTFGGSVFDMSILP
DVVQATDRDFTLGLFTFFDNLAFGQILTYSAILLLITFVITSADSAIYVTSMMTGSQTMK
SKLMWILVLVSITTALVLKNNIDLNKQIAIFGALPFTLILLAQAGIMVKELIKHKP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgggagtcagtagcccttatcagctgttgtatcgcggccgcggccttcctcata
tttcctgaaacggcaatatcttgggttgcagggcttactggttacgtcatccatgaattt
ggattagccttcatcatcattccctctctatttgtgatcttatctctggctatcgccctg
agtccctgggggaaaattaagctaggtgaagatgccaaacccgaatttggctttgtcagc
tggacatccatgttatttgccgcaggtatggggtcggggcttatcttttggggcgtggcc
gagcctattgtccactatgcccatccacctgcatttgtgcctgtggctgatattggtaaa
gatagcgccctggccttaacctatttccattggggcttacatgcatggagcctatatgct
atctcaggcttggtgatggcgtggtttgcctttaataagtccagacctatgaccatttcg
gccagcttcactgataagcctgagtccagccgctatcagctgtttgatcttctggctgtg
gtggcggtgatcttcggagtagcggggaccctagctaacaccatagccttagttcagagt
ggagtggagcaaagtattggctcagatataggcggggttagttttcggctaggcctgcta
gtggccatcactttagccttcaccctgtcatcgaccatggggttggataaagggattaag
aggatgagtctgtttaacctattgttagtcgtggttatgctggtggcggtgatagctctg
gttgaccctctatcagttgcgacgactgtggtcacttcgacgctaagttatctgcaacta
ttaccgtcagtctctttctctatcgatatggcatctcgccaatggagtgaaggttggagc
atcatctattttgtctggtggattgcatgggcaccttttgtcggtccctttatcgcccga
atcagtcgtggccgtaccatacgtcaatatctgctgtgcaccatactcataccaaccatg
acttccattgtctggtttagtacctttggcggcagtgtattcgacatgagtatcttgcct
gatgttgtacaggcaaccgatagagattttaccttaggcctgttcacctttttcgataac
ttggcttttggacaaattctgacctatagcgccatcttactcttgatcacatttgtgata
accagtgcagattcggctatctatgtcaccagcatgatgacgggaagtcagactatgaaa
tctaaattgatgtggatcttagtgctagtgtcgatcaccacggctctggtattaaagaat
aatatcgatctgaataaacagatcgcgatatttggcgcgctgccttttacacttatttta
ctggctcaggcgggcatcatggtgaaagagttgattaaacataagccataa
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