Shewanella violacea: SVI_1075
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Entry
SVI_1075 CDS
T01206
Symbol
glgX
Name
(GenBank) glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
svo
Shewanella violacea
Pathway
svo00500
Starch and sucrose metabolism
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SVI_1075 (glgX)
Enzymes [BR:
svo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SVI_1075 (glgX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
BAJ01046
UniProt:
D4ZH97
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All DBs
Position
1252756..1254903
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AA seq
715 aa
AA seq
DB search
MSQMKLTNGKPYPLGASIDDLGVNFALFSAHATQVTLCIFDEHGNDEIGRFILPKKSQHI
WHGYLEGAREGLLYGYRVDGLFQPLSGHRFNANKLLLDPYAKQLVGECRDNPCHYSYILE
DSEQDLSFDTTDNAASMPKCRVVDHRQLGPVLPVKKSDSQDEMPLSLRRSIIYELHVKGF
TQLHPDIVKHHRGTFAGLGSPESITYLTDLGITSVELMPVQSFFHEPFLQQKLLSNYWGY
NSIGFFAPHQSYLSGDDVLEFRHMVTEFHKAGIEVILDVVYNHTAEGNRLGPTYSFRGID
NLSYYRLSPSEPRYYINDTGCGNTLNIAHPNVLQLVMDSLRYWVEVMGVDGFRFDLATCM
GREIHGFDTGSGFFDALAQDPVLNQVRLIAEPWDIGPGGYQLGQFPMGWSEWNDRYRDTI
RRFWRGDAGILPEFARRFHGSSDLFEHSGRPPAASINFVTSHDGFSLMDLVSYSLRHNQA
NGEDNRDGHQENFSHNYGVEGVTDDADINRLRARQCRNILTTLFLSQGVPMLLAGDEVGH
SLLGNNNAYCQDNPLSWREWQQDIGSNTQLQFTQKLIHLRKRFPLLCHHKYIHEGANVDA
PGLDWFCRQGGVMTKSQWSEAQTRSLSLVITGELEAKKGCRQALLLMLNTDEKSLDFCLP
ELDNLSPWRCLLHTQDSELNSESVSLSKDLNPIYRLQDRSLMLFYAEFKEPVYEC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagatgaagctaactaacggtaagccttatccattaggggcgagtatcgatgat
cttggggtcaactttgccctattctcggcccatgccactcaggtcactctgtgtatcttc
gatgagcatgggaatgacgagataggacgttttatcttgcctaaaaagtcgcaacatatc
tggcatggatatcttgaaggggcgagagaaggtctgttatatggttatcgcgtcgacggt
ttatttcagccgctatctgggcataggttcaatgccaataaactcctgctcgacccctat
gctaagcaattggtgggtgagtgccgtgataacccatgccattacagttatatactcgaa
gatagcgagcaagatctctcctttgacacgactgacaatgcagccagtatgccaaagtgt
cgtgtggtcgaccatcgtcagcttggacctgtgctcccggtgaaaaaaagtgatagccaa
gatgagatgcctctgtctctgaggcgcagcatcatctatgaactgcacgtcaaaggcttt
actcaactgcacccagatattgtcaaacaccatagaggcaccttcgccgggcttggtagc
cctgagtcgataacttatctcaccgatctgggcatcaccagtgtcgagcttatgccggtg
cagagtttcttccatgagcctttcctgcaacagaagctactgagtaactattggggctat
aacagcataggtttttttgcccctcatcagagctatttgagtggtgatgatgtgcttgaa
tttcgtcatatggtgactgaatttcataaggcaggcatcgaagtgatcttagatgtggtt
tataaccacaccgccgagggcaatcgtctcgggccgacctacagtttcaggggcatagac
aatctaagttattaccgtttgagtcccagtgaacctaggtattacatcaatgataccggc
tgcggtaacaccctcaatattgcccatcctaatgtactccaattggtgatggattcgctg
cgttattgggtcgaagtgatgggggtcgatggttttcgtttcgatttagccacttgtatg
ggccgtgaaattcatggcttcgatacaggttcaggtttcttcgatgccttagctcaagat
cctgtgctgaatcaggtacgtttgattgccgagccttgggacataggcccaggtggctat
cagttggggcaattccccatgggctggagcgaatggaacgacaggtatcgcgataccatt
cgccgcttctggcgtggggatgctgggatcttacctgagtttgccagacgttttcatggc
tccagtgatctatttgaacattcaggcaggccgccagccgccagtattaacttcgtcacc
agccacgacggcttctccttgatggatcttgttagttacagcctgagacacaaccaggcc
aatggcgaagacaatcgcgacggtcaccaggaaaacttcagtcataattatggtgtcgaa
ggtgtcacggatgatgccgatattaataggctaagagcaaggcagtgccgcaacatactc
acgactctgtttctgtcccaaggcgtgcccatgttgctggccggagacgaagtcggtcac
tcactgttgggcaataataatgcttattgtcaggacaatcccctgagttggcgtgagtgg
caacaagatatcggcagcaatacacagctgcagtttacccagaagttaattcacctcaga
aaacgtttccctctgctttgtcatcataaatacatacatgagggcgccaatgtggatgct
cccgggctagattggttttgtcgccaaggtggagtgatgaccaagtctcagtggagcgag
gcccagactcgaagtctgagcctggtgataacgggtgaacttgaggcgaaaaagggctgt
cgccaggcactcctcttgatgcttaacacagatgagaagagtctggatttttgtttgcct
gagcttgataacctgtctccctggcgctgcctattacacactcaagatagtgaattaaat
tctgagtctgtgtcactttctaaggatttaaacccgatatatcgcctgcaagacagaagt
ttgatgttgttttatgccgaatttaaggagcctgtttatgagtgttag
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