Shewanella violacea: SVI_1086
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Entry
SVI_1086 CDS
T01206
Name
(GenBank) GGDEF domain protein
Organism
svo
Shewanella violacea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7TMR-DISM_7TM
GGDEF
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
BAJ01057
UniProt:
D4ZHA8
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Position
1269547..1271214
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AA seq
555 aa
AA seq
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MIQRTLLLLLILFSQTAVAVTSIDQSFLFHAKAEQKQPSQHADVLPWMATLEKADSISLT
GGSYWLVMPTLMYDRETKWVISVRNSIVESLDYWVIGDDGSKQHSHSGYYAPYEFLFDYG
REVELNYGVEYWLIVKLESRYFSSVPKVELKPLLEHKKSSDFEAMAVMLCLGGLFFIACY
NLLIFFSIKDRAFLYYGLYVLAYFFGWAVTFHIPAHMWNYHNLEIHHLFFISLPIFNILF
YKHFLQLPEYSPKLWRLSKYLMWVCILALPTSIYLVSYTALIASVLIMLWIGLAITCGNV
CLIKGFAPARYFIFAFTCLLLPAVIILPGNLGLTPDFIEYAELATLIGGTADALLLSLAL
ANKIKLLSEERQTYIKTLGIAWEKARQDGLTQLQNRHAFDEYLQTQPFGIEVKRDEHLIL
LDIDGITQVNHTLGHHEGDCLLKFAAKQLQLICEAHERVKLFRIGGDNFVILLSVEQTQS
VLVQLEQVSNEFAKEGYRKTGISYGYALNTAVKDASDWLRAADRNMYKAKTDKRREKQAH
LRQVMEDESNNLDFI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaagaactctcttgttactactcatcttgtttagccaaacagctgtagctgtt
acctcaatcgaccaatcttttctgtttcatgctaaagctgagcaaaaacaaccctctcaa
catgccgatgtactcccttggatggcgacactggaaaaagctgacagcatcagtttgact
ggtggtagttactggctggtgatgcctacattgatgtacgacagagagactaaatgggtg
atcagtgtcagaaactctatcgttgaatctttggattattgggtgattggtgacgatggc
agtaaacaacactctcacagtggctactatgccccttacgagtttttgtttgattatggc
cgggaagttgagcttaactatggtgtggaatattggcttatagtaaaactggagagtcgc
tacttttcttctgtgcctaaggtggagctcaaacctctgttagaacacaagaaaagttca
gattttgaagccatggctgtgatgttatgcctaggcggactcttcttcattgcctgctat
aacttgctgattttcttttctattaaggatcgtgcctttctttattatggcctctatgta
ttggcatacttttttggttgggctgtgacatttcatatacctgcgcatatgtggaattac
cataacctagagatacaccatctattttttattagtcttccaatttttaatatattgttc
tataaacactttcttcagcttcctgagtattcacctaagctgtggcgtctaagtaagtat
ttgatgtgggtctgtattttggcactgcctaccagtatttacctggtctcctacaccgca
ctcatagcctcagtgttaatcatgttgtggattggcttagcgatcacttgtggtaacgtc
tgcctgatcaaaggtttcgctccagcccgttatttcatctttgcttttacctgtttatta
ctgccagccgtgattattcttccgggtaatttaggcctgacaccggattttatcgaatat
gcagaactcgccaccctcatcgggggaaccgcagatgcactcttactgtctttagcactg
gcaaataagatcaagttattgtctgaggagaggcagacctacatcaagacattgggcatt
gcctgggagaaagcccgtcaagatgggctgacacagctacaaaatcgacacgctttcgac
gaatacttacaaactcagccgtttggcattgaggttaagcgggatgaacacctcatcttg
ttggatatcgatggtatcactcaggtgaaccataccttaggtcatcatgagggagattgt
ttactcaagtttgccgctaaacagcttcaacttatctgtgaagctcatgaaagagttaag
ttatttaggatcgggggagataattttgtcattttactctcggtagaacagactcagtct
gttctggttcaactggagcaagtctccaatgaatttgcgaaagaaggctatcgaaagaca
ggtataagttatggatatgcgttgaatacagcggtgaaggatgccagtgactggttgaga
gccgcagatagaaatatgtataaagctaagacagataaacgccgtgagaaacaggcacat
ttgaggcaagtcatggaggatgaatccaataacttggacttcatttaa
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