Shewanella violacea: SVI_1143
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Entry
SVI_1143 CDS
T01206
Name
(GenBank) lysine decarboxylase family
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
svo
Shewanella violacea
Pathway
svo00230
Purine metabolism
svo00240
Pyrimidine metabolism
svo01100
Metabolic pathways
svo01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SVI_1143
00240 Pyrimidine metabolism
SVI_1143
Enzymes [BR:
svo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
SVI_1143
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
BAJ01114
UniProt:
D4ZHG5
LinkDB
All DBs
Position
complement(1334431..1335783)
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AA seq
450 aa
AA seq
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MIVKVSPKGSMDQLSQMEVDRLKQSAKSELYQLYRNCSLAVLASGLLSDNAENLFEQFND
FNINVLRRERGIKIELTNPPEAAFVDGKIIRGLQEHLFSVLRDIVYISDKYENLKDINLT
NSSHITNVVFDILRNGQVIPLEDPNVVVCWGGHSINAIEYQYTREVGYELGLREMNICTG
CGPGAMEGPMKGATIGHAKQRISQARYVGLTEPSIIAAEPPNQIVNELVILPDIEKRLEA
FVRLGHGIVIFPGGAGTAEELLYLLGILLNKDNQGMPFPLVLTGPKESADYFIKIDEFIG
ATLGEEAQSKYEIVIDDPVRVARIMSHGMDLVKEHRKNTGDSYQYNWSLKIEPEFQLPFN
PTHEMMSNLNLYFQDNKAELAANLRRAFSGIVAGNVKMETIKSVKKHGPFEIKGDPKLMA
MMDTLLSAFVKQQRMKLPGSEYVPCYKIDN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaagtcagccctaaaggaagcatggatcagctttcgcaaatggaagtcgat
cgtctaaaacagagtgctaaaagcgaactctatcaactttaccgcaactgttcattggcc
gtgctcgcatcaggcctactgagcgataacgccgaaaaccttttcgagcaattcaatgat
ttcaacattaatgtcctacgccgagagcgcggtattaagattgaattgaccaaccccccc
gaagccgcatttgtcgatggcaagataatcagaggtcttcaggaacacctgttttccgtg
ctaagagatatcgtttatatcagcgataaatacgaaaaccttaaagatatcaacctgacc
aattctagccatatcaccaacgtcgtcttcgatattttacgtaatggccaggttattcca
ttggaagatcccaatgtcgtcgtatgctggggtggtcacagcattaatgccatcgagtac
cagtacactcgagaagtgggctatgagcttggtttaagagagatgaacatatgtaccggt
tgtggtcccggcgccatggaaggtcccatgaaaggagcgaccataggtcacgcaaagcaa
cgcatatcacaagcaagatatgtgggactcacagaacctagtattatcgccgccgaaccc
ccgaatcaaatcgtcaacgagctagtgatccttcccgatatagagaagcgtttagaagcc
ttcgtccgtttaggtcatggcatagttattttccctgggggagccggcaccgccgaagag
ttgctctatctactcgggattctactcaataaagataaccaaggcatgcccttccccttg
gtacttaccggccctaaagagagcgccgattattttatcaagatcgatgagtttatcgga
gccaccttaggtgaggaagctcagagtaaatacgaaattgtcatcgatgacccggtgcga
gtcgccagaattatgagccacggtatggatctggtcaaagagcaccgaaaaaataccggt
gactcctaccaatataattggtcactgaaaattgaacccgaatttcagctgcctttcaat
cccactcatgagatgatgagcaatctcaacctgtattttcaggataacaaggcggaactt
gccgctaatctgcgcagggcgttttcaggcatagtcgcggggaatgtgaagatggagacc
atcaagagtgttaagaaacatgggcccttcgaaataaaaggcgaccctaagcttatggct
atgatggatactctgctgagcgcattcgttaaacaacagagaatgaaattgccaggtagc
gaatatgtcccttgctacaagatagataattaa
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