Shewanella violacea: SVI_1145
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Entry
SVI_1145 CDS
T01206
Name
(GenBank) TPR domain protein
Organism
svo
Shewanella violacea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
TPR_MalT
TPR_14
TPR_7
SNAP
CFAP70_TPR_C
TPR_19
TPR_11
TPR_6
SUCH1_C
Foie-gras_1
Dicer_platform
Motif
Other DBs
NCBI-ProteinID:
BAJ01116
UniProt:
D4ZHG7
LinkDB
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Position
complement(1337590..1339746)
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AA seq
718 aa
AA seq
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MRIIFVLVIFTLVLAAPSTYAQDHIALEIKFKESPIELLHDLQASISLPIKATSLSAFER
VASDQGYKLDELKQKLQLLTRLYLSSYVKEQNKYRKTEELLSLLKVISTTAYDESYLQVL
SGRYIARSRHDYQQALPYYDQALALLESETNLQTQLLKQLIHFHIGSLHRILHQDKPALM
HLKLYRESTYQLGNDYLIAHAEATLGAFYNMRGQFSLALQHYSEALKLSNHQKKPFFKAD
LQLQLARVYRDLESWDQAIQYAHDADKGFKALNMDRLRAHCMTVIAMVHANQSDWNKAID
YYLNAQQLIYKDQNMLAQALNYHNLGEAYFQNGNTKTSFEFLFKSNAIFLSKKSNHYLVF
NDLLIAQVATADKNWRLAVKHGNLALMNAQKLELKGEQIEALQYLSQAYRNLKQNDKAFG
TLDKLIALNLSMPETQNTPSYDTSSVLAEQKLKLEVNKIQGEKETLRSQLARSRLLLITS
IILVCLISLIGVNQWRRKSLLAVKLSEAEDNGIIEPVSGLPGYKGFIEELESPYKDTPCT
LALISLTGQLNADIKQGFQCNNNMNKIQLQALDSDFSGSVYLVRPGLFILCLTEEITPDE
LLQRCRNTIDKDYGDTCIHMGILPLPLLMDPDIRLSPQIHFGAAQMTLAAALSLGQEADY
YVSIKALNFAPSAIFTTPLYLHLEKGIMRGLLKVNTNGDKKDILWPRWKSHEHLDVTE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattatctttgtacttgtgatattcactctggttttagccgccccttcgacttac
gctcaagatcatatcgcccttgaaattaagttcaaagaatcacccattgaattgttacat
gatttacaggcctccatcagcttacccataaaagccactagtctctcagcttttgaacga
gtagccagtgaccaaggttataaactcgatgagttaaaacaaaagttgcaactgctcaca
cgactctatctcagcagctatgtgaaagagcaaaataaataccgcaaaactgaagagtta
ttgtcactcctcaaggtgatcagtaccacagcctacgatgaaagctatctgcaagtatta
agtggaagatacatagccaggagtcgacatgattatcagcaagcactgccctattatgac
caagctctggctctgttagagagcgagacaaatctgcagactcaactgttaaaacaactg
atacattttcatattggcagcctacatcgtatcttacatcaggataagccagccctgatg
cacctgaaactctatagagagtcgacctatcagctggggaatgattacttaattgcccat
gccgaagccactttaggcgctttctataatatgcgcgggcaattttctttggccttacaa
cattacagcgaagcacttaaactctcaaatcaccagaaaaaaccttttttcaaggccgat
ttacagctacaactggcacgggtatatcgagacctagagtcctgggatcaagccatccag
tatgcacatgatgcagataaaggctttaaggccctcaatatggatcgattacgcgctcat
tgcatgactgtaatcgctatggttcatgccaatcaaagcgactggaataaggctattgat
tactatctcaatgcccagcagctcatttacaaagatcaaaatatgcttgctcaggcgtta
aactatcataatttaggcgaagcctattttcaaaacggcaacaccaaaacctcttttgaa
tttctgtttaaatccaatgccatttttctatctaaaaaaagtaaccattatcttgtgttt
aatgatctcttgattgcccaagttgccacagcggataaaaattggcgactggcagtaaag
catggcaacttagccttaatgaatgcccagaagctcgaactgaaaggagagcagatagag
gcattacaatatctgtctcaggcatatagaaaccttaaacagaatgataaagcctttggg
acactggataagcttattgccctaaacttgtccatgccagaaacacaaaatactcccagc
tatgacacctcatcggtacttgccgaacaaaaattaaaacttgaagtcaataagattcag
ggtgagaaagagacactcagatctcagttagcacgctcgagactgctgttgattacctct
attattttggtgtgcttaatatcactcataggggtaaaccaatggcgaagaaaaagccta
ttagcagttaagttatctgaggcagaagataacggcattatcgagccagtgagtggttta
cctggttataaaggcttcatcgaagagcttgagtctccctacaaggacacaccttgtacc
cttgcattgatttctctaacgggccaattaaacgcggatatcaagcaaggttttcagtgc
aataacaacatgaacaaaattcagctccaagccttagatagcgatttttcaggcagtgtt
taccttgtcaggccaggactatttattctgtgtttaactgaggagatcaccccagatgaa
ttattgcaaaggtgccgtaacaccatagataaagattatggagacacttgtatacatatg
ggcatcctgccacttcctctattgatggacccggacattagactgtcgccccagattcac
tttggcgcggcacagatgaccctggcggccgccttgagcctagggcaggaagcagattac
tatgtttccattaaggcattaaactttgccccatcggctatcttcacaacgcctctatat
ttacacttggaaaaaggcataatgcgcggattattgaaggtcaataccaatggcgacaag
aaagacattctctggcccagatggaaaagccatgaacatctggatgtaacagagtga
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