Shewanella violacea: SVI_1246
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Entry
SVI_1246 CDS
T01206
Symbol
lpxB
Name
(GenBank) lipid A disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
svo
Shewanella violacea
Pathway
svo00540
Lipopolysaccharide biosynthesis
svo01100
Metabolic pathways
Module
svo_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SVI_1246 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
SVI_1246 (lpxB)
Enzymes [BR:
svo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
SVI_1246 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
svo01005
]
Lipid A
SVI_1246 (lpxB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Glyco_trans_1_4
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
BAJ01217
UniProt:
D4ZHR8
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All DBs
Position
1453767..1454912
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AA seq
381 aa
AA seq
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MSDNKQMIFAMVAGEISGDILGAGLIKALQECYPNARFIGIGGPRMEALGFESMFSYEEL
AVMGIVEVLSRLPRLLKVRKTLIDEICAISPDCFIGIDAPDFNIGLELKLKQRGIKTVHY
VSPSVWAWRPKRIFKIAKATDMVLSLLPFEKAFYDKHQVPCTFVGHTLADDIPLISDKLE
ARRALGLDLNAEYLAVLPGSRGGELKQLAEPFVRAAKLIKQQYPDIRFVTPVVNAKRRAQ
FEEALKTYAPDLEIHILEGHSREVMAASDCILLASGTATLEAMLVKRPMVVAYRVSPITY
RIAKSLMLIDKFSLPNLLAGEDLVTELIQEDCTPELIAAAVSETLDGDFTPLKNKFLELH
TQLRCNASARAAEAVVKLISH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacaaacagatgatatttgctatggttgctggagagatctccggtgatatt
ttaggtgctggtttaatcaaggcgctacaagaatgctatcccaatgcacgatttatcggt
attggtggacctcgtatggaagccttgggctttgaatctatgttctcctatgaagaactt
gccgtgatgggcatagttgaagtcctgtctcgtctgcctagattattgaaagttcgcaaa
actttgattgatgaaatttgtgctattagccccgattgtttcatcggcatagatgcgcca
gattttaatatcggtctcgaacttaagctaaagcagcggggcataaagacggtgcattat
gtcagcccttcggtatgggcttggcgaccgaaacgcattttcaaaattgccaaggcgacg
gatatggtgttgtcattattgccttttgaaaaagcgttttacgataaacatcaagtgccg
tgtacattcgtgggccacaccttagcggatgatattccacttattagtgataaacttgag
gctcgcagggccttgggcttagatcttaatgccgagtatctggctgttttacccggttct
cgtggcggcgagcttaaacagttagccgagcctttcgttcgtgcggctaagctaatcaag
cagcaatatccggacattcgtttcgtgacaccggttgtgaatgctaagcgtcgagctcag
tttgaagaggcgcttaaaacatatgccccagatcttgaaatccatatcctggaaggacac
tcgagagaggtgatggccgccagtgactgtatcttgttggcgtcggggactgcaacgctg
gaagccatgctagtcaaaaggcccatggttgtcgcttatcgtgttagccctatcacttat
cgcattgccaagtccttgatgctgattgacaagttttctctacctaacctgcttgccgga
gaggatttggtgactgagctcattcaagaagactgtactcctgagctgattgcagccgcg
gtgtctgaaacattggacggggatttcactccacttaagaataaatttctcgaactccat
acacagttgaggtgtaatgccagcgctcgcgccgcagaagctgtggttaagctcatctct
cattag
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