Shewanella violacea: SVI_1315
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Entry
SVI_1315 CDS
T01206
Name
(GenBank) sensory box/GGDEF family protein
Organism
svo
Shewanella violacea
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_3
PAS_11
PAS_9
ZapB
Copper-fist
Motif
Other DBs
NCBI-ProteinID:
BAJ01286
UniProt:
D4ZHY7
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Position
1511850..1512857
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AA seq
335 aa
AA seq
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MCADNKISKFQDKIKALQDENIELTRQNISIEEKLSAALDGTGLCLWQQHIPSGKLTIFN
RDWGHMLGYSEQELSAHVDSWKEKLHPEDRDWVLAAFEDHVSGKTESYQAIYRMIHKDGS
VSWVSDRGRIVEYDAESRPVRIMGTHIDITQEKCYELDLAQLAHCDPLTHLLNRKALEQA
FYAQQVSQPSIGGALFFIDLDGFKQINDRYGHRLGDLVLMDVAQTLKDKAGDLAQLARFG
GDEFVILHTDINKEVLVNLAKSILDHYRRPVYIDSCEVKLGLSIGISLFDCSEPFIAICE
HADRAMYRVKQRGKHDYSFWQQNDPLAFELTKLVS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcagacaataaaatcagcaaatttcaggataagataaaggcgctgcaagatgaa
aatatcgagctgacaaggcagaatataagcatcgaggagaagttaagcgcagctttagat
ggtacaggcttatgtctctggcagcagcatattcccagcgggaaactgaccatctttaat
cgagactgggggcacatgctgggttattcggagcaagagctgtcggctcatgtagatagc
tggaaagaaaaacttcacccagaagacagagattgggtactcgccgcgtttgaagatcat
gtatcgggcaagactgagtcttatcaagctatctaccggatgatccataaagatggtagc
gttagttgggtatcagacagaggacgcatcgtcgaatatgatgctgaatctaggccggtt
cgcattatggggactcatatcgatattacccaagagaaatgctacgaacttgatttagcc
cagctagctcactgtgaccctctcactcatctgctcaatcgcaaggcgctagagcaagct
ttttatgctcaacaagttagtcagccaagcattggcggtgcacttttcttcatcgatctc
gatggttttaagcaaattaacgatagatatggtcaccggctcggggatctggtgttaatg
gacgtggcacagacacttaaggataaggcgggagacttagctcagctcgctcgcttcggg
ggggatgagttcgtgatattacataccgacattaataaagaggtgttggtgaacttggct
aaaagcattttggatcactatcgcagacccgtttacatagattcctgtgaagttaaatta
ggcttaagcataggtatcagtttattcgattgttcagagccctttattgctatttgtgag
catgcagatagggccatgtatcgagtgaagcagaggggcaaacatgattattccttttgg
caacagaatgaccctctcgcatttgaactaaccaaactggttagttaa
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