Shewanella violacea: SVI_1376
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Entry
SVI_1376 CDS
T01206
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_1376 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_1376 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_1376 (hisS)
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SVI_1376 (hisS)
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SVI_1376 (hisS)
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SVI_1376 (hisS)
Prokaryotic type
SVI_1376 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
Motif
Other DBs
NCBI-ProteinID:
BAJ01347
UniProt:
D4ZI48
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All DBs
Position
1574590..1575864
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AA seq
424 aa
AA seq
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MAKQIQAIRGMNDILPTQSPLWQKLEAVLRETVSAYGYSEIRTPIVESTDLFKRSIGEVT
DIVEKEMYTFDDRNGDSLTLRPEGTASTVRAGNQHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFNQFGVEVYGIGTADVDAEVLMLSARLWEKLGITDHVTLELNTLGDPAERATYREA
LIAYLEQFKEQLDEESQRRMYTNPLRVLDTKNPEVQALLVDAPELMDYLGEETRAHFSHL
CELLDAVGIKYVINPRLVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVEQLGGKNT
PAVGFAMGLERIVLMLETLELTDDIPATVDVYVTAMGDASKVEAIKIAQALRTELPGLRV
MSHCGGGNFKKQMKRADKSGALIALVIGEDELASNQVAVKYLREKKEQALVARDGLATYI
AELI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacagatccaagcgattcgcggaatgaacgatattctgcctacccaaagccct
ctatggcaaaaactagaagctgtactccgtgaaactgtgagtgcctacgggtatagtgag
atccgtactcccatcgttgagagtacagacctttttaagcgttcgattggtgaagtcacc
gatattgtcgaaaaagagatgtatacctttgatgacagaaacggtgacagcttaacccta
cgtcctgaaggcacagcctcaaccgtacgtgcgggtaatcaacacggtttactttataac
caagagcaacgcctttggtatatgggtcctatgtttaggcatgagcgaccacagaaaggg
cgttaccgtcaatttaatcagtttggtgtcgaagtttatggcattggaacagcggatgta
gatgctgaagttctgatgctttctgctcgcctgtgggagaagctggggatcacagaccat
gtgactctagagttaaacactttaggcgatcctgccgagcgtgccacatatcgtgaagcg
ctaattgcttatcttgagcagtttaaagagcagcttgatgaagaaagtcagcgccgtatg
tataccaatccgctgcgcgtgttggatacaaagaacccagaggtacaagcacttctagtt
gatgcacctgagttgatggattatcttggcgaagaaactcgtgcacatttttcacattta
tgtgaactcttagacgcggttggcatcaaatacgtcattaacccacgtttagttcgtggt
ttagattattataatcgcaccgtttttgagtgggtaacgacaagtttgggctctcagggt
accgtgcttgccggtggtcgttatgacggattggtcgaacagttaggcggtaaaaacacc
ccagctgtcggttttgctatgggtctagagcgcatagtcttgatgttagagacgctggag
ctgactgatgatattcctgctactgtcgatgtatatgtcaccgccatgggcgatgcgagt
aaagttgaagcgattaaaatcgcccaggcacttcgcaccgagttacctggtttgagagtg
atgagccattgtggtggtggaaacttcaagaaacagatgaaacgcgcagataagagtggt
gcactcatcgccttagttatcggtgaagatgaactggccagtaaccaagtcgcggttaaa
tatctgcgtgaaaagaaagaacaagctttagttgctcgtgacggattagcaacttatatc
gcggaactgatttaa
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