Shewanella violacea: SVI_1378
Help
Entry
SVI_1378 CDS
T01206
Name
(GenBank) PQQ enzyme repeat domain protein
KO
K17713
outer membrane protein assembly factor BamB
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_1378
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_1378
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_LRRK2
Beta-prop_EMC1_N
DUF6906
Motif
Other DBs
NCBI-ProteinID:
BAJ01349
UniProt:
D4ZI50
LinkDB
All DBs
Position
1576509..1577696
Genome browser
AA seq
395 aa
AA seq
DB search
MKSWCKTLVACSLSIGLLSACSSSDVEEEPISPLPSIEASVFPEVSWSATVGSGVGDYYS
RLRPAARYDKIYVADRYGQVVAFDEETGAKVWSKDFSSAFKDNILAKNKGAKLAAGVTVA
RDMVFIGGESGLLGALDAETGEKVWSALASGELLSAPTVAEDIVVVNTSSGSLEAFKIED
GEKLWTYKSKLPTLTLRGTGSANYEAGGFFVGTADGKIAVVIKNNGQAAWEQAIYTPKGG
NEFTRMSDVDMQPLVVGKNLYAVSFNGNLVSMELRTGRIVWSRKYSSFHELADSGVNLFL
VDDHSRIYSVDKRNGLETWSNIELTNRNLTSPAVFKGYLVVGDFEGYLHFIDKSTGEVVG
RVEVDSSGLYSQPLVVGDSIYVQTRGGKVARITLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaacactagtcgcatgtagtctgagcataggtttgttatctgcc
tgttcatctagcgatgttgaagaagagccaataagcccactgcctagtatcgaagcaagc
gtatttcctgaagtaagctggagtgcgactgttggtagcggtgtcggtgattattattca
cgccttcgtccggcagccaggtatgacaagatttacgttgctgatagatatggtcaagtc
gtcgccttcgatgaagagactggagctaaggtttggagcaaagattttagctcggcattt
aaagataatatcttggccaagaacaaaggcgctaaactagccgctggagtcacagtcgcc
agagacatggtctttatcggcggtgaaagtggtctactcggtgccttagatgcagaaact
ggtgaaaaagtatggtctgccttagccagtggtgagctactttcagccccaacggttgct
gaagacatagtagtggtcaatactagctcaggaagtttagaagcatttaaaatcgaagat
ggtgaaaagttatggacttataagtctaagctgccgactttgactcttcgcggtacaggt
tcagctaactacgaagccggtggtttcttcgtaggtactgccgacggcaagattgccgta
gtgatcaaaaacaatggtcaggctgcctgggaacaagctatttacacgccaaaaggtggt
aatgagtttacccgtatgtccgatgttgatatgcagcccttggtcgttggtaaaaaccta
tatgcagttagctttaacggtaatttagtttcaatggagcttagaaccggacgtattgtt
tggtcgcgtaagtattcaagtttccatgaattagctgattcaggtgtgaacctgtttcta
gtagatgaccatagccgtatctattcagtagacaaacgtaatggtttagagacttggagc
aatattgaattaactaatcgtaatttaacctctccagccgtctttaaaggttatcttgtt
gttggtgactttgagggttacctgcacttcatagataagtcgaccggagaagtcgttggc
cgcgtcgaagtggacagttctggcttatatagtcagcccttggttgtcggtgatagcatt
tatgttcagactcgcggcggaaaagttgctagaataacgcttccgtaa
DBGET
integrated database retrieval system
