Shewanella violacea: SVI_1389
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Entry
SVI_1389 CDS
T01206
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
svo
Shewanella violacea
Pathway
svo00190
Oxidative phosphorylation
svo01100
Metabolic pathways
svo02020
Two-component system
Module
svo_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SVI_1389 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SVI_1389 (cydB)
Enzymes [BR:
svo01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
SVI_1389 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
BAJ01360
UniProt:
D4ZI61
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Position
1595236..1596375
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AA seq
379 aa
AA seq
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MFDYEMLRFIWWALIGFLLIGFAVTDGFDMGVGALLPILGKDDTERRIMINTIAPHWDGN
QVWLITAGGALFAAWPMVYGVSFSGFYVAMMLVLFALYLRPVGFDYRSKIEDPRWRSAWD
WALFIGGFVPPLIIGVAFGNLLQGVPFNFDEYLRATYHGGFFGLLNPFGILAGLVCVSMF
MLQGATWLQMKTESELRARAANAAQVLAFLLFIFFGAAGIWLVNGIDGYVITSVLDTYGV
SDPTIKTVAVEAGAWLTNYDKYPVTMMFPVLGLLMPLLVILSSRLNRSGFAFFFSSIGVA
AIILTCGSAMFPFVMPSSLDPNVSLTMWDATASEKSLTVMTWAAIIFVPIVLSYTIFTYY
KMFGRLSRSFIEDNKTSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaaatgttaagatttatctggtgggcgctgataggcttcctcttgatc
ggttttgccgttaccgatggtttcgatatgggagttggtgcactcttgcctatcttaggt
aaggatgacacagaacgtcgtatcatgattaataccatagccccacattgggacggtaac
caggtatggctaatcactgcaggtggtgcactgtttgccgcttggcctatggtatatggc
gtctcgttttcgggattctatgtggccatgatgttggtgctatttgccttgtaccttaga
ccagttggcttcgattatcgttctaaaattgaagatccaagatggcgttcagcatgggat
tgggcactgtttatcggtggcttcgtaccgccgctgatcataggtgttgcatttggtaac
ttgcttcaaggtgtaccattcaacttcgatgagtatctacgtgcgacttaccatggtggc
ttcttcggcttgttgaaccctttcggtattttggcgggtcttgtctgcgttagcatgttt
atgttgcagggcgctacttggctacaaatgaagactgagagtgagttgagagcccgtgcc
gcgaatgcagctcaggtgctagccttcctactgtttatcttttttggtgcagcaggtatc
tggctggtcaatggtattgacggatatgtgatcacctctgttctcgatacttatggggtt
tcagatccaaccattaagacggttgctgtggaagctggcgcttggttgactaactatgat
aagtatcctgtgactatgatgttccctgtactgggactcttgatgccgctactagtgata
ttatcaagtcgcttgaatcgttctggttttgctttcttcttcagttctataggtgttgcc
gcaattatcttgacctgtggctcagctatgttcccatttgtaatgccttcgtctttggat
ccaaacgtgagtttgaccatgtgggatgccactgcaagtgagaagtcgctaactgtaatg
acttgggctgcgataatctttgttccgatagtgttatcttacacaatctttacttactat
aagatgttcggacgtttatctcgcagtttcatcgaagacaacaagacgtcactttactaa
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