Shewanella violacea: SVI_1397
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Entry
SVI_1397 CDS
T01206
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_1397
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_1397
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
BAJ01368
UniProt:
D4ZI69
LinkDB
All DBs
Position
1604939..1607071
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AA seq
710 aa
AA seq
DB search
MENKTFKLSLIIAAIYPHLSYAADSIEVNDTAAMEVIEVHAYRSNYQNEETTSASKMALS
QLETPRAILTIDKKLIEDQQATSLSTVLKNASSTQSIMESDGHEAFSIRGFELSTNEGYL
RDGEQKYSLIQEPVEMYESVEVLTGPAGLLYGQSAPGGLINMITKKPMYQNHVSMTQDIG
ADNFYRSVLDVTGPLTDKIRARVIASKQSQDSWRHYKDGNSPTTTRNLFAVMIDADLSDD
TMISLRFDDKEQNGFNDSGAIFDEKGNLLVNKDVIWDQPWSVNNKDETSYGLKLVHFFDS
DWKFSASAHHLDMKNDAQTGSPKAESIQSDGSYMISAGNRHNSYNVNTASFDLTGEFETG
NIQHRLLVGSNLVDHSYKRRSSYGAIVEANINPNTGIPGIPTDYPSPESSNQYDRETYGI
YTQDLITFNDQWEILVGARYDIYVKHKSKEDAELGKGEDRTYTNVLPNLSIMYHPTDNTT
IYTTYSESFQPKDPVDSITDANDGMERDPEMGLLYEVGFKYKMSEALLTTSIFQIKKENI
SITTKPYVDPDDSSIDRITQQQGSEIHNGIDINLTGRIHPLVTLSAGAAYIDAKYEDQPE
KIGVHPTDIPHFKANAWVNYALTNKLDLNLGVYYTGDSYGDNKNEEDKNEAYTLLDFGAI
YRMNVSEDHDVKLQFKINNILDEDYVTGGDYSGKEFGRGRNYILTGTYQF
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagacttttaaattatctcttatcattgcggcaatatatcctcacctatct
tacgcagcagattcaatagaagttaacgatacagctgccatggaagttatcgaagttcat
gcttatcgttctaattaccagaatgaagaaacgacctcagcatctaaaatggcactttca
cagttagaaactcctcgagccatacttaccattgataagaaattaattgaagatcagcaa
gcaacgtctctcagtacagtattaaagaatgcatcaagtacacaatccataatggaatcc
gatggacatgaagcattttctattcgtggttttgaactatctacaaacgagggttattta
agggatggtgaacagaagtattcattaattcaagaacccgttgagatgtacgaaagtgta
gaagtccttaccggtcctgccggtcttctttatggtcaatctgcacccgggggcttaatt
aatatgataactaaaaagcccatgtatcaaaatcatgtatctatgactcaagatataggc
gctgataatttttatcgttctgtgctggatgtaactgggcctctaacagataaaattcgt
gcccgtgtaatagcatctaaacaatcgcaagattcatggaggcactataaagacggtaat
agcccaacgacaacacgaaatctgttcgctgttatgattgatgctgatctgagcgatgat
actatgatatcccttagatttgatgataaagagcagaatggatttaacgattccggagct
atattcgatgagaaaggcaatttactggtcaataaagacgtaatttgggaccaaccatgg
agcgtcaacaataaagacgagactagctatggcttgaaacttgtgcacttctttgattcg
gattggaaattttctgctagtgctcatcatcttgatatgaaaaatgatgctcaaacggga
tcgcctaaagctgaatcaattcaaagtgatggcagttatatgatttcagctggtaatcgt
cataatagctataatgtaaacacagccagttttgatcttactggagaatttgaaacggga
aatatacagcatcgtttattggtagggtctaatttagttgatcattcatataagcgtaga
agtagttatggtgcgattgtagaagcaaacataaacccaaatacaggcattccaggaata
cccacagattacccatcaccagaaagcagtaatcaatatgaccgtgaaacgtatggtatt
tatactcaagacttaattacgtttaatgatcaatgggaaattcttgtgggtgcccgatac
gatatttacgtaaaacataagtctaaggaagatgctgaactaggcaaaggagaggacaga
acctacacaaatgtattgcctaacttatcaataatgtatcaccctacagataacactacg
atttacactacctattcggagtcatttcaacctaaggatcctgtagatagtattacagat
gctaatgatggtatggaacgagatcctgaaatgggtttattatatgaagttggctttaag
tataaaatgagtgaggccttgttaacaacttctatatttcaaattaaaaaagaaaacata
tctataaccactaagccttatgtcgatccagatgattcaagtattgatagaattacacag
caacaaggttcagaaattcataatggtattgatattaatttaacggggcggatacatcca
cttgtcaccctatctgcaggcgctgcttatatagatgcaaaatatgaagatcaacctgaa
aaaataggtgttcaccccacagacatccctcacttcaaagcaaatgcttgggtcaattat
gcactgacaaataaattagatctcaatcttggcgtttattataccggcgacagttatggt
gataataagaatgaagaagataaaaatgaggcttatacactattagattttggtgccata
tatcgcatgaatgtaagtgaagatcatgatgtaaaattacaatttaaaattaataatata
ctcgatgaagactatgtaacgggtggagattatagcggtaaagaatttggtcgtggaagg
aactacatattaactggtacctatcagttttaa
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